Difference between revisions of "OMP ST:6326 ! Escherichia coli UPEC CFT073"

From OMPwiki
(Table edited by Kcunningham via TableEdit)
(Table edited by Kcunningham via TableEdit)
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[https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi NCBI Taxonomy ID:13750 cranberry powder]
 
[https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi NCBI Taxonomy ID:13750 cranberry powder]
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OMP_AN:7519
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OMP:0000111
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presence of cell motility by swimming
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Relative to:
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<hr>Genotype differences:<br>
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Nothing to compare<br/>
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<hr>Condition differences:<br>
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Nothing to compare<br/>
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*temperature:37C
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*medium:swimming motility medium
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ECO:0005803
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motility assay evidence
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PMID:21821749
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Revision as of 14:15, 8 November 2016

Strain Summary

Strain Name

Escherichia coli UPEC CFT073

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: UPEC
  • NCBI Taxonomy ID: 199310
Genotype
Strain Reference
Strain availability

ATCC 700928

Ancestry
Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:7515

OMP:0000253

gene expression phenotype

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • other:p(PfliC)-lux
  • temperature:37C
  • medium:0.4% glucose
  • medium:M9 minimal medium
 ECO:0000049

reporter gene assay evidence

PMID:21821749[1]

UniProtKB:A0A0H2VAE3

OMP_AN:7516

OMP:0000268

decreased gene expression

Relative to: OMP_AN:7515

Genotype differences:

no differences

Condition differences:

medium:cPACs (0.1 mg/mL)?

  • other:p(PfliC)-lux
  • temperature:37C
  • medium:0.4% glucose
  • medium:M9 minimal medium
  • medium:cPACs (0.1 mg/mL)
 ECO:0000049

reporter gene assay evidence

PMID:21821749[1]

UniProtKB:A0A0H2VAE3 CHEBI:26267 cranberry-derived proanthocyanidins

OMP_AN:7517

OMP:0000029

presence of flagellum

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:LB broth
 ECO:0005033

electron microscopy evidence

PMID:21821749[1]

OMP_AN:7518

OMP:0000215

decreased number of flagella

Relative to: OMP_AN:7517

Genotype differences:

no differences

Condition differences:

medium:CP (10 mg/mL)?

  • temperature:37C
  • medium:CP (10 mg/mL)
  • medium:LB broth
 ECO:0005033

electron microscopy evidence

PMID:21821749[1]

NCBI Taxonomy ID:13750 cranberry powder

OMP_AN:7519

OMP:0000111

presence of cell motility by swimming

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:swimming motility medium
 ECO:0005803

motility assay evidence

PMID:21821749[1]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 1.3 1.4 Hidalgo, G et al. (2011) Inhibition of Escherichia coli CFT073 fliC expression and motility by cranberry materials. Appl. Environ. Microbiol. 77 6852-7 PubMed OMPwiki page
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