Category:Strain:Escherichia coli K-12 AB1886: Difference between revisions

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PMID:5335128
PMID:5335128
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!align=left align='left' bgcolor='#CCCCFF' |Source
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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[http://cgsc.biology.yale.edu/StrainQuery.php CGSC# 1886]
[http://cgsc.biology.yale.edu/StrainQuery.php CGSC# 1886]
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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decreased resistance to UV-A radiation
decreased resistance to UV-A radiation
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Relative to:OMP_AN:52
Relative to: OMP_AN:52
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Genotype differences:<br>
<hr>Genotype differences:<br>
+other:uvrA6 <br/><br>
+other:uvrA6
Condition differences:<br>
<hr>Condition differences:<br>
no differences
no differences
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altered UV radiation resistance
altered UV radiation resistance
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Relative to:OMP_AN:53
Relative to: OMP_AN:53
<br>
 
Genotype differences:<br>
<hr>Genotype differences:<br>
+other:uvrA6 <br/><br>
+other:uvrA6
Condition differences:<br>
<hr>Condition differences:<br>
no differences
no differences
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decreased resistance to UV-C radiation
decreased resistance to UV-C radiation
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Relative to:OMP_AN:56
Relative to: OMP_AN:56
<br>
 
Genotype differences:<br>
<hr>Genotype differences:<br>
+other:uvrA6 <br/><br>
+other:uvrA6
Condition differences:<br>
<hr>Condition differences:<br>
no differences
no differences
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Revision as of 00:24, 18 August 2015

Strain Summary

Strain Name

AB1886

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Taxon: K-12
  • NCBI Taxon ID: 83333
Genotype other:DE(gpt-proA)62 other:F- other:Lambda- other:Rac-0 other:araC14 other:argE3(Oc) other:galK2(Oc) other:glnX44(AS) other:hisG4(Oc) other:kdgK51 other:lacY1 other:leuB6(Am) other:mgl-51 other:mtl-1 other:qsr'-0 other:rfbC1 other:rpoS396(Am) other:rpsL31(strR) other:thiE1 other:thr-1 other:tsx-33 other:uvrA6 other:xylA5
Strain Reference

PMID:5335128[1]

Strain availability

CGSC# 1886

Ancestry

parent:AB1157

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:61

OMP:0007204

decreased resistance to UV-A radiation

Relative to: OMP_AN:52

Genotype differences:

+other:uvrA6

Condition differences:

no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 1

OMP_AN:62

NOT

OMP:0005125

altered UV radiation resistance

Relative to: OMP_AN:53

Genotype differences:

+other:uvrA6

Condition differences:

no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 2

OMP_AN:63

OMP:0007201

decreased resistance to UV-C radiation

Relative to: OMP_AN:56

Genotype differences:

+other:uvrA6

Condition differences:

no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[2]

Reference Figure 3

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Howard-Flanders, P et al. (1966) Three loci in Escherichia coli K-12 that control the excision of pyrimidine dimers and certain other mutagen products from DNA. Genetics 53 1119-36 PubMed
  2. ↑ 2.0 2.1 2.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed

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