Category:Strain:Burkholderia contaminans MS14 MS14KC1: Difference between revisions

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Table edited by Tkveton via TableEdit
Table edited by Tkveton via TableEdit
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:108
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OMP:0006118
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decreased antimicrobial peptide production
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Relative to:OMP_AN:89
<br>
Genotype differences:<br>
+other:ocfC::nptII <br/><br>
Condition differences:<br>
no differences
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*other:Indicator fungus-''Geotrichum candidum''
*temperature:25 C
*medium:100 mL PDA
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ECO:0000182
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in vitro culture assay evidence
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PMID:23435879
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Purified product from the mutant has the same amount of anti fungal activity


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Revision as of 19:09, 23 June 2015

Strain Summary

Strain Name

MS14KC1

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Taxon: MS14
  • NCBI Taxon ID: 488447
Genotype

other:ocfC::nptII

Strain Reference

PMID:23435879[1]

Source
Ancestry

parent:MS14

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:108

OMP:0006118

decreased antimicrobial peptide production

Relative to:OMP_AN:89
Genotype differences:
+other:ocfC::nptII

Condition differences:
no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:23435879[1]

Purified product from the mutant has the same amount of anti fungal activity

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Chen, KC et al. (2013) The Burkholderia contaminans MS14 ocfC gene encodes a xylosyltransferase for production of the antifungal occidiofungin. Appl. Environ. Microbiol. 79 2899-905 PubMed

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