Category:Strain:Escherichia coli K-12 RJF574: Difference between revisions

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Table edited by Tkveton via TableEdit
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:70
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OMP:0007204
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decreased resistance to UV-A radiation
|
Relative to:OMP_AN:52
<br>
Genotype differences:<br>
+other:uvrA::Tn10 <br/><br>
Condition differences:<br>
no differences
|
*other:8-MOP (0.1 microgram ml^-1)
*other:UV-A
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ECO:0001027
|
colony counting evidence
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PMID:20004108
|
|
Reference figure 1
|-
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OMP_AN:71
|
NOT
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OMP:0005125
|
altered UV radiation resistance
|
Relative to:OMP_AN:53
<br>
Genotype differences:<br>
+other:uvrA::Tn10 <br/><br>
Condition differences:<br>
no differences
|
*other:3-CPs (0.1 microgram ml^-1)
*other:UV-A
|
ECO:0001027
|
colony counting evidence
|
PMID:20004108
|
|
Reference figure 2
|-
|
OMP_AN:72
|
|
OMP:0007201
|
decreased resistance to UV-C radiation
|
Relative to:OMP_AN:56
<br>
Genotype differences:<br>
+other:uvrA::Tn10 <br/><br>
Condition differences:<br>
no differences
|
other:UV-C
|
ECO:0001027
|
colony counting evidence
|
PMID:20004108
|
|
Reference figure 3


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Revision as of 19:58, 5 June 2015

Strain Summary

Strain Name

RJF574

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Taxon: K-12
  • NCBI Taxon ID: 83333
Genotype other:(gpt-proA)62(del) other:F- other:Lambda- other:Rac-0 other:araC14 other:argE3(Oc) other:galK2(Oc) other:glnX44(AS) other:hisG4(Oc) other:kdgK51 other:lacY1 other:leuB6(Am) other:mgl-51 other:mtl-1 other:qsr'-0 other:rfbC1 other:rpoS396(Am) other:rpsL31(strR) other:thiE1 other:thr-1 other:tsx-33 other:uvrA::Tn10 other:xylA5
Strain Reference
Source
Ancestry
  • parent:AB1157
  • parent:N3137
Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:70

OMP:0007204

decreased resistance to UV-A radiation

Relative to:OMP_AN:52
Genotype differences:
+other:uvrA::Tn10

Condition differences:
no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference figure 1

OMP_AN:71

NOT

OMP:0005125

altered UV radiation resistance

Relative to:OMP_AN:53
Genotype differences:
+other:uvrA::Tn10

Condition differences:
no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference figure 2

OMP_AN:72

OMP:0007201

decreased resistance to UV-C radiation

Relative to:OMP_AN:56
Genotype differences:
+other:uvrA::Tn10

Condition differences:
no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference figure 3

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed

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