Difference between revisions of "OMP ST:4241 ! Schizosaccharomyces pombe orc4delta"

Revision as of 12:47, 11 January 2018

Strain Name	Schizosaccharomyces pombe orc4delta
Synonyms
Taxon Information	Pangenome: Schizosaccharomyces pombe Subspecies and/or strain: orc4delta NCBI Taxonomy ID:4896
Genotype	ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 orc4delta
Strain Reference	PMID:20473289^[1]
Strain availability	http://us.bioneer.com/products/spombe/spombeoverview.aspx
Ancestry	parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
Annotated phenotypes
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Annotation ID	OMP ID	OMP term name	Relative phenotype information	ECO ID	ECO term name	Reference
OMP_AN:5119	OMP:0007461	nonviable vegetative cell population	Relative to: OMP_AN:1028 Genotype differences: +orc4delta -h+/h+ Condition differences: no differences			PMID:20473289^[1]
OMP_AN:12108	OMP:0007461	nonviable vegetative cell population	Relative to: OMP_AN:1028 Genotype differences: +orc4delta -h+/h+ Condition differences: no differences	ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:13752	OMP:0007728	altered mitotic cell cycle	Relative to: OMP_AN:1028 Genotype differences: +orc4delta -h+/h+ Condition differences: no differences	ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:14441	OMP:0007725	inviable after spore germination	Relative to: OMP_AN:1028 Genotype differences: +orc4delta -h+/h+ Condition differences: no differences	ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:14442	OMP:0007739	altered spore germ tube morphology	Relative to: OMP_AN:1028 Genotype differences: +orc4delta -h+/h+ Condition differences: no differences	ECO:0001098	microscopy evidence	PMID:23697806^[2]
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See Help:References for how to manage references in OMPwiki.

↑ ^1.0 ^1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
↑ ^2.0 ^2.1 ^2.2 ^2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page

@@ Line 74: / Line 74: @@
 OMP:0007461
 |
-abolished viability
+nonviable vegetative cell population
 |
 Relative to: OMP_AN:1028
 <hr>Genotype differences:<br>
-+leu1-32/leu1-32orc4delta  -leu1-32/leu1-32 -h+/h+
++orc4delta  -h+/h+
 <hr>Condition differences:<br>
 no differences
@@ Line 107: / Line 107: @@
 <hr>Genotype differences:<br>
-+leu1-32/leu1-32orc4delta  -leu1-32/leu1-32 -h+/h+
++orc4delta  -h+/h+
 <hr>Condition differences:<br>
 no differences
@@ Line 113: / Line 113: @@
 |
+ECO:0001098
 |
+microscopy evidence
 |
 PMID:23697806
@@ Line 135: / Line 135: @@
 <hr>Genotype differences:<br>
-+leu1-32/leu1-32orc4delta  -leu1-32/leu1-32 -h+/h+
++orc4delta  -h+/h+
+<hr>Condition differences:<br>
+no differences
+|
+|
+ECO:0001098
+|
+microscopy evidence
+|
+PMID:23697806
+|
+|
+|-
+|
+OMP_AN:14441
+|
+|
+OMP:0007725
+|
+inviable after spore germination
+|
+Relative to: OMP_AN:1028
+<hr>Genotype differences:<br>
++orc4delta  -h+/h+
+<hr>Condition differences:<br>
+no differences
+|
+|
+ECO:0001098
+|
+microscopy evidence
+|
+PMID:23697806
+|
+|
+|-
+|
+OMP_AN:14442
+|
+|
+OMP:0007739
+|
+altered spore germ tube morphology
+|
+Relative to: OMP_AN:1028
+<hr>Genotype differences:<br>
++orc4delta  -h+/h+
 <hr>Condition differences:<br>
 no differences