Difference between revisions of "OMP ST:6329 ! Escherichia coli O157:H7 EDL933"
Kcunningham (talk | contribs) (Table edited by Kcunningham via TableEdit) |
Kcunningham (talk | contribs) (Table edited by Kcunningham via TableEdit) |
||
Line 1,913: | Line 1,913: | ||
| | | | ||
UniProtKB:Q8XAY7 lsrA | UniProtKB:Q8XAY7 lsrA | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7639 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7631 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:Q93U24 csgA | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7640 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7632 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:P43261 eae | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7641 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7633 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:Q7DB80 espA | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7642 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7634 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:Q7DB81 espD | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7643 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7635 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:O85645 ler | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7644 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7636 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:Q8XAY9 lsrB | ||
+ | | | ||
+ | |||
+ | |- | ||
+ | | | ||
+ | OMP_AN:7645 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0000268 | ||
+ | | | ||
+ | decreased gene expression | ||
+ | | | ||
+ | Relative to: OMP_AN:7637 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | no differences | ||
+ | <hr>Condition differences:<br> | ||
+ | medium:Acacia honey (0.5%)? | ||
+ | | | ||
+ | *temperature:37C | ||
+ | *medium:Acacia honey (0.5%) | ||
+ | *medium:LB medium | ||
+ | | | ||
+ | ECO:0005524 | ||
+ | | | ||
+ | DNA microarray evidence | ||
+ | | | ||
+ | PMID:22047137 | ||
+ | | | ||
+ | UniProtKB:Q8XA21 lsrF | ||
| | | | ||
Revision as of 15:39, 7 December 2016
Contents
Strain Summary
Strain Name |
Escherichia coli O157:H7 EDL933 |
---|---|
Synonyms | |
Taxon Information |
|
Genotype | |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:7573 |
OMP:0000176 |
biofilm phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Biofilm formation assay | |||
OMP_AN:7574 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Coladonin (0.5 ug/mL)? |
|
ECO:0000181 |
in vitro assay evidence |
Biofilm formation assay | |||
OMP_AN:7575 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Coumarin (0.5 ug./mL)? |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:28794 Coumarin |
Biofilm formation assay | ||
OMP_AN:7576 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Umbelliferone (0.5 ug/mL)? |
|
ECO:0000181 |
in vitro assay evidence |
CHEBI:27510 Umbelliferone |
Biofilm formation assay | ||
OMP_AN:7577 |
OMP:0000067 |
presence of cell motility by swarming |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:7578 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:7577 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:28794 Coumarin |
|||
OMP_AN:7579 |
OMP:0007092 |
decreased cell motility by swarming |
Relative to: OMP_AN:7577 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:27510 Umbelliferone |
|||
OMP_AN:7580 |
OMP:0000111 |
presence of cell motility by swimming |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005803 |
motility assay evidence |
||||
OMP_AN:7581 |
NOT |
OMP:0005324 |
altered cell motility by swimming |
Relative to: OMP_AN:7580 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:28794 Coumarin |
||
OMP_AN:7582 |
NOT |
OMP:0005324 |
altered cell motility by swimming |
Relative to: OMP_AN:7580 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0005803 |
motility assay evidence |
CHEBI:27510 Umbelliferone |
||
OMP_AN:7583 |
OMP:0000084 |
pilus phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005033 |
electron microscopy evidence |
||||
OMP_AN:7584 |
OMP:0000028 |
decreased number of pili |
Relative to: OMP_AN:7583 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0005033 |
electron microscopy evidence |
CHEBI:28794 Coumarin |
|||
OMP_AN:7585 |
OMP:0000028 |
decreased number of pili |
Relative to: OMP_AN:7583 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0005033 |
electron microscopy evidence |
CHEBI:27510 Umbelliferone |
|||
OMP_AN:7591 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q93U24 csgA |
|||
OMP_AN:7592 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0ABK8 csgB |
|||
OMP_AN:7593 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XCE8 flhD |
|||
OMP_AN:7594 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0AF07 motB |
|||
OMP_AN:7595 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DI68 stx2 |
|||
OMP_AN:7596 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XAY7 lsrA |
|||
OMP_AN:7597 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8X902 luxS |
|||
OMP_AN:7598 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
rrsG |
|||
OMP_AN:7599 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DH26 stx1 |
|||
OMP_AN:7600 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7591 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q93U24 csgA CHEBI:28794 Coumarin |
|||
OMP_AN:7601 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7591 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q93U24 csgA CHEBI:27510 Umbelliferone |
|||
OMP_AN:7602 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7591 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q93U24 csgA CHEBI:490095 Esculetin |
|||
OMP_AN:7603 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7592 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0ABK8 csgB CHEBI:28794 Coumarin |
|||
OMP_AN:7604 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7592 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0ABK8 csgB CHEBI:27510 Umbelliferone |
|||
OMP_AN:7605 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7592 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0ABK8 csgB CHEBI:490095 Esculetin |
|||
OMP_AN:7606 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7593 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XCE8 flhD CHEBI:28794 Coumarin |
|||
OMP_AN:7607 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7593 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XCE8 flhD CHEBI:27510 Umbelliferone |
|||
OMP_AN:7608 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7593 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XCE8 flhD CHEBI:490095 Esculetin |
|||
OMP_AN:7609 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7594 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0AF07 motB CHEBI:28794 Coumarin |
|||
OMP_AN:7610 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7594 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0AF07 motB CHEBI:27510 Umbelliferone |
|||
OMP_AN:7611 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7594 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:P0AF07 motB CHEBI:490095 Esculetin |
|||
OMP_AN:7612 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7595 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DI68 stx2 CHEBI:490095 Esculetin |
|||
OMP_AN:7613 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7596 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XAY7 lsrA CHEBI:28794 Coumarin |
|||
OMP_AN:7614 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7596 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XAY7 lsrA CHEBI:27510 Umbelliferone |
|||
OMP_AN:7615 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7595 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DI68 stx2 CHEBI:28794 Coumarin |
|||
OMP_AN:7616 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7595 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DI68 stx2 CHEBI:27510 Umbelliferone |
|||
OMP_AN:7617 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7596 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8XAY7 lsrA CHEBI:490095 Esculetin |
|||
OMP_AN:7618 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7597 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8X902 luxS CHEBI:28794 Coumarin |
|||
OMP_AN:7619 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7597 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8X902 luxS CHEBI:27510 Umbelliferone |
|||
OMP_AN:7620 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7597 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q8X902 luxS CHEBI:490095 Esculetin |
|||
OMP_AN:7621 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7598 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
rrsG CHEBI:28794 Coumarin |
|||
OMP_AN:7622 |
OMP:0000267 |
increased gene expression |
Relative to: OMP_AN:7598 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
rrsG CHEBI:27510 Umbelliferone |
|||
OMP_AN:7623 |
NOT |
OMP:0007080 |
altered gene expression |
Relative to: OMP_AN:7598 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
rrsG CHEBI:490095 Esculetin |
||
OMP_AN:7624 |
OMP:0007080 |
altered gene expression |
Relative to: OMP_AN:7599 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DH26 stx1 CHEBI:28794 Coumarin |
|||
OMP_AN:7625 |
OMP:0007080 |
altered gene expression |
Relative to: OMP_AN:7599 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DH26 stx1 CHEBI:27510 Umbelliferone |
|||
OMP_AN:7626 |
OMP:0007080 |
altered gene expression |
Relative to: OMP_AN:7599 Genotype differences: no differences Condition differences: medium:Esculetin (50 ug/mL)? |
|
ECO:0000109 |
reverse transcription polymerase chain reaction evidence |
UniProtKB:Q7DH26 stx1 CHEBI:490095 Esculetin |
|||
OMP_AN:7627 |
OMP:0000176 |
biofilm phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0000181 |
in vitro assay evidence |
Crystal violet biofilm assay | |||
OMP_AN:7628 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7627 Genotype differences: no differences Condition differences: medium:>= Acacia honey (0.1 %)? |
|
ECO:0000181 |
in vitro assay evidence |
Crystal violet biofilm assay | |||
OMP_AN:7629 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7627 Genotype differences: no differences Condition differences: other:>= Polyfloral honey (0.1 %)? |
|
ECO:0000181 |
in vitro assay evidence |
Crystal violet biofilm assay | |||
OMP_AN:7630 |
OMP:0007026 |
decreased biofilm formation |
Relative to: OMP_AN:7627 Genotype differences: no differences Condition differences: medium:>= Clover honey (0.1 %)? |
|
ECO:0000181 |
in vitro assay evidence |
Crystal violet biofilm assay | |||
OMP_AN:7631 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q93U24 csgA |
|||
OMP_AN:7632 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:P43261 eae |
|||
OMP_AN:7633 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q7DB80 espA |
|||
OMP_AN:7634 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q7DB81 espD |
|||
OMP_AN:7635 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:O85645 ler |
|||
OMP_AN:7636 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q8XAY9 lsrB |
|||
OMP_AN:7637 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q8XA21 lsrF |
|||
OMP_AN:7638 |
OMP:0000253 |
gene expression phenotype |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q8XAY7 lsrA |
|||
OMP_AN:7639 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7631 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q93U24 csgA |
|||
OMP_AN:7640 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7632 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:P43261 eae |
|||
OMP_AN:7641 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7633 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q7DB80 espA |
|||
OMP_AN:7642 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7634 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q7DB81 espD |
|||
OMP_AN:7643 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7635 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:O85645 ler |
|||
OMP_AN:7644 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7636 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q8XAY9 lsrB |
|||
OMP_AN:7645 |
OMP:0000268 |
decreased gene expression |
Relative to: OMP_AN:7637 Genotype differences: no differences Condition differences: medium:Acacia honey (0.5%)? |
|
ECO:0005524 |
DNA microarray evidence |
UniProtKB:Q8XA21 lsrF |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.00 1.01 1.02 1.03 1.04 1.05 1.06 1.07 1.08 1.09 1.10 1.11 1.12 1.13 1.14 1.15 1.16 1.17 1.18 1.19 1.20 1.21 1.22 1.23 1.24 1.25 1.26 1.27 1.28 1.29 1.30 1.31 1.32 1.33 1.34 1.35 1.36 1.37 1.38 1.39 1.40 1.41 1.42 1.43 1.44 1.45 1.46 1.47 1.48 Lee, JH et al. () Coumarins reduce biofilm formation and the virulence of Escherichia coli O157:H7. Phytomedicine 21 1037-42 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 Lee, JH et al. (2011) Low concentrations of honey reduce biofilm formation, quorum sensing, and virulence in Escherichia coli O157:H7. Biofouling 27 1095-104 PubMed OMPwiki page
e
o
- OMP:0000028 ! decreased number of pili
- OMP:0000067 ! presence of motility by swarming
- OMP:0000084 ! pilus phenotype
- OMP:0000111 ! presence of motility by swimming
- OMP:0000176 ! biofilm phenotype
- OMP:0000253 ! gene expression phenotype
- OMP:0000267 ! increased gene expression
- OMP:0000268 ! decreased gene expression
- OMP:0005324 ! altered cell motility by swimming
- OMP:0007026 ! decreased biofilm formation
- OMP:0007080 ! altered gene expression
- OMP:0007092 ! decreased motility by swarming