Category:Strain:Escherichia coli K-12 JC3890: Difference between revisions

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Table edited by Tkveton via TableEdit
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:64
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OMP:0007204
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decreased resistance to UV-A radiation
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Relative to:OMP_AN:52
<br>
Genotype differences:<br>
+other:(bioA-moaA)301(del) <br/><br>
Condition differences:<br>
no differences
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*other:8-MOP (0.1 microgram ml^-1)
*other:UV-A
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ECO:0001027
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colony counting evidence
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PMID:20004108
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Reference Figure 1
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OMP_AN:65
|
|
OMP:0007204
|
decreased resistance to UV-A radiation
|
Relative to:OMP_AN:53
<br>
Genotype differences:<br>
+other:(bioA-moaA)301(del) <br/><br>
Condition differences:<br>
no differences
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*other:3-CPs (0.1 microgram ml^-1)
*other:UV-A
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ECO:0001027
|
colony counting evidence
|
PMID:20004108
|
|
Reference figure 2
|-
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OMP_AN:66
|
|
OMP:0007201
|
decreased resistance to UV-C radiation
|
Relative to:OMP_AN:56
<br>
Genotype differences:<br>
+other:(bioA-moaA)301(del) <br/><br>
Condition differences:<br>
no differences
|
other:UV-C
|
ECO:0001027
|
colony counting evidence
|
PMID:20004108
|
|
Reference figure 3


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Revision as of 19:48, 5 June 2015

Strain Summary

Strain Name

JC3890

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Taxon: K-12
  • NCBI Taxon ID: 83333
Genotype other:(bioA-moaA)301(del) other:(gpt-proA)62(del) other:F- other:Lambda- other:Rac-0 other:araC14 other:argE3(Oc) other:galK2(Oc) other:glnX44(AS) other:hisG4(Oc) other:kdgK51 other:lacY1 other:leuB6(Am) other:mgl-51 other:mtl-1 other:qsr'-0 other:rfbC1 other:rpoS396(Am) other:rpsL31(strR) other:thiE1 other:thr-1 other:tsx-33 other:xylA5
Strain Reference
Source

CGSC# 3890

Ancestry

parent:AB1157

Annotated phenotypes


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Notes

Deletion of (bioA-moaA)301 results in the deletion of uvrB.

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:64

OMP:0007204

decreased resistance to UV-A radiation

Relative to:OMP_AN:52
Genotype differences:
+other:(bioA-moaA)301(del)

Condition differences:
no differences

  • other:8-MOP (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference Figure 1

OMP_AN:65

OMP:0007204

decreased resistance to UV-A radiation

Relative to:OMP_AN:53
Genotype differences:
+other:(bioA-moaA)301(del)

Condition differences:
no differences

  • other:3-CPs (0.1 microgram ml^-1)
  • other:UV-A
 ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference figure 2

OMP_AN:66

OMP:0007201

decreased resistance to UV-C radiation

Relative to:OMP_AN:56
Genotype differences:
+other:(bioA-moaA)301(del)

Condition differences:
no differences

other:UV-C

ECO:0001027

colony counting evidence

PMID:20004108[1]

Reference figure 3

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Lage, C et al. (2010) Differential survival of Escherichia coli uvrA, uvrB, and uvrC mutants to psoralen plus UV-A (PUVA): Evidence for uncoupled action of nucleotide excision repair to process DNA adducts. J. Photochem. Photobiol. B, Biol. 98 40-7 PubMed

Pages in category "Strain:Escherichia coli K-12 JC3890"

The following 2 pages are in this category, out of 2 total.

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