OMP ST:8631 ! Bacillus subtilis 168 CAG74623: Difference between revisions

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==Strain Summary==
==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
||
Bacillus subtilis 168 CAG74623
|-
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
||
 
|-
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
||
*Pangenome: Bacillus subtilis
*Subspecies and/or strain: 168
*NCBI Taxonomy ID: NCBI Taxon ID: 224308
|-
!align=left align='left' bgcolor='#CCCCFF' |Genotype
||
trpC2 lacA::Pxyl-dcas9(ErmR) amyE::Pveg-sgRNA_ydiP(CmR)
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
||
PMID:27238023
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
||
 
|-
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
||
parent:OMP ST:796 ! Bacillus subtilis 168
|-
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
||
 
 
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==Phenotype Annotation==
==Phenotype Annotation==
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|-
|
OMP_AN:13245
|
 
|
OMP:0005342
|
increased cell lysis
|
Relative to: OMP_AN:13098
 
<hr>Genotype differences:<br>
+lacA +amyE
<hr>Condition differences:<br>
no differences
|
*temperature:37C
*medium:LB medium
|
ECO:0001232
|
microscopy evidence used in manual assertion
|
PMID:27238023
|
is_a OMP:0007682 Terminal Phenotype
|
|-
|
OMP_AN:13246
|
 
|
OMP:0007599
|
abolished population growth
|
Relative to: OMP_AN:13216
 
<hr>Genotype differences:<br>
+lacA +amyE
<hr>Condition differences:<br>
no differences
|
*temperature:37C
*medium:LB medium
|
ECO:0001232
|
microscopy evidence used in manual assertion
|
PMID:27238023
|
is_a OMP:0007682 Terminal Phenotype
|
|-
|
OMP_AN:13247
|
 
|
OMP:0007667
|
filamenting cell shape
|
Relative to: OMP_AN:13045
 
<hr>Genotype differences:<br>
+lacA +amyE
<hr>Condition differences:<br>
no differences
|
*temperature:37C
*medium:LB medium
|
ECO:0001232
|
microscopy evidence used in manual assertion
|
PMID:27238023
|
is_a OMP:0007682 Terminal Phenotype
|
 
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Latest revision as of 16:41, 30 November 2017

Strain Summary

Strain Name

Bacillus subtilis 168 CAG74623

Synonyms
Taxon Information
  • Pangenome: Bacillus subtilis
  • Subspecies and/or strain: 168
  • NCBI Taxonomy ID: NCBI Taxon ID: 224308
Genotype

trpC2 lacA::Pxyl-dcas9(ErmR) amyE::Pveg-sgRNA_ydiP(CmR)

Strain Reference

PMID:27238023[1]

Strain availability
Ancestry

parent:OMP ST:796 ! Bacillus subtilis 168

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:13245

OMP:0005342

increased cell lysis

Relative to: OMP_AN:13098

Genotype differences:

+lacA +amyE

Condition differences:

no differences

  • temperature:37C
  • medium:LB medium
 ECO:0001232

microscopy evidence used in manual assertion

PMID:27238023[1]

is_a OMP:0007682 Terminal Phenotype

OMP_AN:13246

OMP:0007599

abolished population growth

Relative to: OMP_AN:13216

Genotype differences:

+lacA +amyE

Condition differences:

no differences

  • temperature:37C
  • medium:LB medium
 ECO:0001232

microscopy evidence used in manual assertion

PMID:27238023[1]

is_a OMP:0007682 Terminal Phenotype

OMP_AN:13247

OMP:0007667

filamenting cell shape

Relative to: OMP_AN:13045

Genotype differences:

+lacA +amyE

Condition differences:

no differences

  • temperature:37C
  • medium:LB medium
 ECO:0001232

microscopy evidence used in manual assertion

PMID:27238023[1]

is_a OMP:0007682 Terminal Phenotype


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 1.3 Peters, JM et al. (2016) A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria. Cell 165 1493-1506 PubMed
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