OMP ST:1805 ! Schizosaccharomyces pombe knd1delta: Difference between revisions

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|- align='left' bgcolor='#CCCCFF'
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|-
|
OMP_AN:2041
|
 
|
OMP:0007460
|
viable cell
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
 
|
 
|
PMID:20473289
|
 
|
|-
|
OMP_AN:8675
|
 
|
OMP:0007460
|
viable vegetative cell population
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
 
|
 
|
PMID:23697806
|
 
|
|-
|
OMP_AN:13395
|
 
|
OMP:0007728
|
altered mitotic cell cycle
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:13939
|
 
|
OMP:0007707
|
increased vegetative cell length
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:13970
|
 
|
OMP:0007708
|
altered vegetative cell shape
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:18635
|
NOT
|
OMP:0007708
|
altered vegetative cell shape
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:19371
|
 
|
OMP:0007716
|
viable vegetative cell
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:26714
|
 
|
OMP:0007802
|
increased vegeative cell population growth rate
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32knd1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
medium:glucose MM?
|
*temperature:25-32C
*medium:glucose MM
|
ECO:0007147
|
competitive growth assay evidence used in manual assertion
|
PMID:25452419
|
 
|


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Latest revision as of 19:38, 20 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe knd1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: knd1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32knd1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:2041

OMP:0007460

viable cell

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:8675

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:13395

OMP:0007728

altered mitotic cell cycle

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13939

OMP:0007707

increased vegetative cell length

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:13970

OMP:0007708

altered vegetative cell shape

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:18635

NOT

OMP:0007708

altered vegetative cell shape

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:19371

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:26714

OMP:0007802

increased vegeative cell population growth rate

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32knd1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

medium:glucose MM?

  • temperature:25-32C
  • medium:glucose MM
 ECO:0007147

competitive growth assay evidence used in manual assertion

PMID:25452419[3]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed
  3. ↑ Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed
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