Difference between revisions of "OMP ST:951 ! MS1011"

From OMPwiki
(Page creation by SpecialNewPage)
 
(→‎Notes)
 
(4 intermediate revisions by 2 users not shown)
Line 2: Line 2:
  
 
==Strain Summary==
 
==Strain Summary==
−
<newTableEdit>
+
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.8324.D57894d1f51bb7-->
−
Template:Strain_info_table
+
<!--
−
</newTableEdit>
+
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{|  id="D57894d1f51bb7"  class=" tableEdit Strain_info_table" 
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 +
||
 +
MS1011
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 +
||
 +
MS1350 fliK1011
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 +
||
 +
*Pangenome: Escherichia coli
 +
*Subspecies and/or strain: K-12
 +
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=83333&lvl=3&lin=f&keep=1&srchmode=1&unlock 83333]
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 +
||
 +
F- lambda- hisG4(Oc) argE3(Oc) thyA galU51 thiE1 rpsL31(strR) uvrC34 mtl-1 xylA5 rfbC1 mgl-51 kdgK51 e14-(?) fliK1011
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 +
||
 +
PMID:4567134
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 +
||
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 +
||
 +
*ancestor:OMP ST:777 ! Escherichia coli K-12 AB1884
 +
*parent:OMP ST:922 ! Escherichia coli K-12 MS1350
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 +
||
 +
 
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.8324.D57894d1f51bb7&page=8324&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 +
|}
 +
<noinclude>
 +
<!-- OMP category tags -->
 +
</noinclude>
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.8324.D57894d1f51bb7--></protect>
  
  
 
==Notes==
 
==Notes==
 +
In the paper, fliK is referred to by the old name flaE.<ref name='PMID:4567134'/> The fliK gene controls hook length.<ref name='PMID:9729611'/>
 +
 +
==Phenotype Annotation==
 +
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.8324.Z57894d1f54ea3-->
 +
<!--
 +
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Z57894d1f54ea3"  class=" tableEdit OMP_annotation_table dataTable" 
 +
|- align='left' bgcolor='#CCCCFF'
 +
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 +
|-
 +
|
 +
OMP_AN:731
 +
|
  
 +
|
 +
OMP:0007000
 +
|
 +
abolished cell motility
 +
|
 +
Relative to: OMP_AN:718
  
−
==Phenotype Annotation==
+
<hr>Genotype differences:<br>
−
<newTableEdit>
+
+fliK1011
−
Template:OMP_annotation_table
+
<hr>Condition differences:<br>
−
</newTableEdit>
+
no differences
 +
|
 +
medium:Motility agar
 +
|
 +
swim plate assay
 +
|
 +
 
 +
|
 +
PMID:4567134
 +
|
 +
 
 +
|
 +
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.8324.Z57894d1f54ea3&page=8324&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 +
|}
 +
<noinclude>
 +
<!-- OMP category tags -->
 +
</noinclude>
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.8324.Z57894d1f54ea3--></protect>
  
  

Latest revision as of 12:37, 18 July 2016

Strain Summary

Strain Name

MS1011

Synonyms

MS1350 fliK1011

Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

F- lambda- hisG4(Oc) argE3(Oc) thyA galU51 thiE1 rpsL31(strR) uvrC34 mtl-1 xylA5 rfbC1 mgl-51 kdgK51 e14-(?) fliK1011

Strain Reference

PMID:4567134[1]

Strain availability
Ancestry
Annotated phenotypes


edit table



Notes

In the paper, fliK is referred to by the old name flaE.[1] The fliK gene controls hook length.[2]

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:731

OMP:0007000

abolished cell motility

Relative to: OMP_AN:718

Genotype differences:

+fliK1011

Condition differences:

no differences

medium:Motility agar

swim plate assay

PMID:4567134[1]


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Silverman, M & Simon, M (1973) Genetic analysis of flagellar mutants in Escherichia coli. J. Bacteriol. 113 105-13 PubMed OMPwiki page
  2. ↑ Berlyn, MK (1998) Linkage map of Escherichia coli K-12, edition 10: the traditional map. Microbiol. Mol. Biol. Rev. 62 814-984 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:951_!_MS1011&oldid=20632"