Difference between revisions of "OMP ST:791 ! Burkholderia contaminans MS14 MS14MT18"

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*Pangenome: Burkholderia contaminans
 
*Pangenome: Burkholderia contaminans
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*Taxon: MS14
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*Subspecies and/or strain: Taxon: MS14
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*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
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*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
 
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences

Latest revision as of 13:25, 6 June 2017

Strain Summary

Strain Name

MS14MT18

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Subspecies and/or strain: Taxon: MS14
  • NCBI Taxonomy ID: NCBI Taxon ID: 488447
Genotype

ocfE::Tn5

Strain Reference
Strain availability
Ancestry

parent:MS14

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:92

OMP:0006178

abolished antimicrobial peptide production

Relative to: OMP_AN:89

Genotype differences:

+ocfE -

Condition differences:

no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:19167363[1]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Gu, G et al. (2009) Biosynthesis of an antifungal oligopeptide in Burkholderia contaminans strain MS14. Biochem. Biophys. Res. Commun. 380 328-32 PubMed OMPwiki page
  2. ↑ Gu, G et al. (2011) Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14. Appl. Environ. Microbiol. 77 6189-98 PubMed OMPwiki page
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