Difference between revisions of "OMP ST:171 ! Bacillus subtilis 168 1S48"

From OMPwiki
(Page creation by SpecialNewPage)
 
(Table edited by Andersonk282 via TableEdit)
 
(5 intermediate revisions by 2 users not shown)
Line 2: Line 2:
  
 
==Strain Summary==
 
==Strain Summary==
−
<newTableEdit>
+
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.6787.R55ca3450bcfc1-->
−
Template:Strain_info_table
+
<!--
−
</newTableEdit>
+
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{|  id="R55ca3450bcfc1"  class=" tableEdit Strain_info_table" 
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 +
||
 +
Bacillus subtilis 168 1S48
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 +
||
 +
A3
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 +
||
 +
*Pangenome: Bacillus subtilis
 +
*Subspecies and/or strain: 168
 +
*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=224308&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 224308]
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 +
||
 +
spoIIIB2 trpC2
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 +
||
 +
*other:[http://www.bgsc.org/viewdetail.php?bgscid=1S48&Search=spoIIIB Bacillus Genetic Stock Center]
 +
*PMID:4197271
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 +
||
 +
[http://www.bgsc.org/viewdetail.php?bgscid=1S48&Search=spoIIIB Bacillus Genetic Stock Center]
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 +
||
 +
ancestor:Bacillus subtilis 168
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 +
||
 +
 
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6787.R55ca3450bcfc1&page=6787&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 +
|}
 +
<noinclude>
 +
<!-- OMP category tags -->
 +
</noinclude>
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6787.R55ca3450bcfc1--></protect>
  
  
Line 11: Line 60:
  
 
==Phenotype Annotation==
 
==Phenotype Annotation==
−
<newTableEdit>
+
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.6787.D55ca3450c0352-->
−
Template:OMP_annotation_table
+
<!--
−
</newTableEdit>
+
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="D55ca3450c0352"  class=" tableEdit OMP_annotation_table dataTable" 
 +
|- align='left' bgcolor='#CCCCFF'
 +
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 +
|-
 +
|
 +
OMP_AN:377
 +
|
 +
 
 +
|
 +
OMP:0008020
 +
|
 +
endospore formation stopped at stage III
 +
|
 +
Relative to: OMP_AN:243
 +
 
 +
<hr>Genotype differences:<br>
 +
+spoIIIB2 +trpC2  -other:trpC2
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
*temperature:37C
 +
*medium:[[Lactate minimal medium of Donnellan,Nags, and Levinson| lactate minimal medium]]
 +
|
 +
ECO:0000182
 +
|
 +
in vitro culture assay evidence
 +
|
 +
PMID:4197271
 +
|
 +
 
 +
|
 +
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6787.D55ca3450c0352&page=6787&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 +
|}
 +
<noinclude>
 +
<!-- OMP category tags -->
 +
</noinclude>
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6787.D55ca3450c0352--></protect>
  
  

Latest revision as of 14:58, 18 August 2015

Strain Summary

Strain Name

Bacillus subtilis 168 1S48

Synonyms

A3

Taxon Information
  • Pangenome: Bacillus subtilis
  • Subspecies and/or strain: 168
  • NCBI Taxonomy ID: 224308
Genotype

spoIIIB2 trpC2

Strain Reference
Strain availability

Bacillus Genetic Stock Center

Ancestry

ancestor:Bacillus subtilis 168

Annotated phenotypes


edit table



Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:377

OMP:0008020

endospore formation stopped at stage III

Relative to: OMP_AN:243

Genotype differences:

+spoIIIB2 +trpC2 -other:trpC2

Condition differences:

no differences

ECO:0000182

in vitro culture assay evidence

PMID:4197271[1]


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Piggot, PJ (1973) Mapping of asporogenous mutations of Bacillus subtilis: a minimum estimate of the number of sporeulation operons. J. Bacteriol. 114 1241-53 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:171_!_Bacillus_subtilis_168_1S48&oldid=17347"