OMP ST:798 ! Burkholderia contaminans MS14 MS14GG78: Difference between revisions

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*Pangenome: Burkholderia contaminans  
*Pangenome: Burkholderia contaminans  
*Taxon: MS14
*Subspecies and/or strain: Taxon: MS14
*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
!align=left align='left' bgcolor='#CCCCFF' |Genotype
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other:ocfJ::nptII
ocfJ::nptII
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:21742901
PMID:21742901
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!align=left align='left' bgcolor='#CCCCFF' |Source
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:110
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OMP:0006118
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decreased antimicrobial peptide production
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Relative to: OMP_AN:89
<hr>Genotype differences:<br>
+other:ocfJ::nptII  -
<hr>Condition differences:<br>
no differences
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*other:Indicator fungus-''Geotrichum candidum''
*temperature:25 C
*medium:100 mL PDA
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ECO:0000182
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in vitro culture assay evidence
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PMID:21742901
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Latest revision as of 19:06, 21 June 2016

Strain Summary

Strain Name

MS14GG78

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Subspecies and/or strain: Taxon: MS14
  • NCBI Taxonomy ID: NCBI Taxon ID: 488447
Genotype

ocfJ::nptII

Strain Reference

PMID:21742901[1]

Strain availability
Ancestry

parent:MS14

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:110

OMP:0006118

decreased antimicrobial peptide production

Relative to: OMP_AN:89

Genotype differences:

+other:ocfJ::nptII -

Condition differences:

no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:21742901[1]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Gu, G et al. (2011) Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14. Appl. Environ. Microbiol. 77 6189-98 PubMed
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