OMP ST:74826 ! Bacteroides thetaiotaomicron ATCC 29148: Difference between revisions
Mia.Medrano (talk | contribs) Table edited by $2 via TableEdit |
Mia.Medrano (talk | contribs) Table edited by $2 via TableEdit |
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information | ||
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference | ||
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PMID: 8955399 | PMID: | ||
8955399 | |||
PMID: | |||
2722748 | |||
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability | !align=left align='left' bgcolor='#CCCCFF' |Strain availability | ||
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry | !align=left align='left' bgcolor='#CCCCFF' |Ancestry | ||
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OMP_AN: | OMP_AN:37607 | ||
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OMP:0006024 | |||
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presence of organic carbon source utilization | |||
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Relative to: | |||
<hr>Genotype differences:<br> | |||
Nothing to compare<br/> | |||
<hr>Condition differences:<br> | |||
Nothing to compare<br/> | |||
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*temperature:37C | |||
*medium:0.5% amylopectin | |||
*medium:defined medium | |||
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ECO:0007082 | |||
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colony size phenotypic evidence used in manual assertion | |||
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PMID:2722748 | |||
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CHEBI:28057 Amylopectin | |||
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Table 1 | |||
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OMP_AN:37608 | |||
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OMP:0006024 | |||
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presence of organic carbon source utilization | |||
| | |||
Relative to: | |||
<hr>Genotype differences:<br> | |||
Nothing to compare<br/> | |||
<hr>Condition differences:<br> | |||
Nothing to compare<br/> | |||
| | |||
*temperature:37C | |||
*medium:0.5% amylose | |||
*medium:defined medium | |||
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ECO:0007082 | |||
| | |||
colony size phenotypic evidence used in manual assertion | |||
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PMID:2722748 | |||
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CHEBI:28107 Amylose | |||
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Table 1 | |||
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OMP_AN:37605 | |||
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OMP: | OMP:0007280 | ||
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presence of enzymatic activity | |||
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Relative to: | Relative to: | ||
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PMID:8955399 | PMID:8955399 | ||
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UniProtKB: | UniProtKB: G8JZS4 Glucan 1,4-alpha-glucosidase Sus B | ||
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Table 2 | |||
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OMP_AN:37609 | |||
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OMP:0006024 | |||
| | |||
presence of organic carbon source utilization | |||
| | |||
Relative to: | |||
<hr>Genotype differences:<br> | |||
Nothing to compare<br/> | |||
<hr>Condition differences:<br> | |||
Nothing to compare<br/> | |||
| | |||
*temperature:37C | |||
*medium:0.5% pullulan | |||
*medium:defined medium | |||
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ECO:0007082 | |||
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colony size phenotypic evidence used in manual assertion | |||
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PMID:2722748 | |||
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CAS:9057-02-7 | |||
Pullulan | |||
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Table 1 | |||
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OMP_AN: | OMP_AN:37606 | ||
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OMP: | OMP:0007280 | ||
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presence of enzymatic activity | |||
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Relative to: | Relative to: | ||
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PMID:8955399 | PMID:8955399 | ||
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UniProtKB: | UniProtKB: Q8A1G0 Neopullulanase Sus A | ||
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Table 2 | |||
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Latest revision as of 23:14, 17 November 2021
Strain Summary
| Strain Name |
Bacteroides thetaiotaomicron ATCC 29148 |
|---|---|
| Synonyms |
VPI-5482 |
| Taxon Information |
|
| Genotype | |
| Strain Reference | |
| Strain availability | |
| Ancestry |
|
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:37607 |
OMP:0006024 |
presence of organic carbon source utilization |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0007082 |
colony size phenotypic evidence used in manual assertion |
CHEBI:28057 Amylopectin |
Table 1 | ||
|
OMP_AN:37608 |
OMP:0006024 |
presence of organic carbon source utilization |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0007082 |
colony size phenotypic evidence used in manual assertion |
CHEBI:28107 Amylose |
Table 1 | ||
|
OMP_AN:37605 |
OMP:0007280 |
presence of enzymatic activity |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
ENVO:Cell Extract |
ECO:0005801 |
enzymatic activity assay evidence used in manual assertion |
UniProtKB: G8JZS4 Glucan 1,4-alpha-glucosidase Sus B |
Table 2 | ||
|
OMP_AN:37609 |
OMP:0006024 |
presence of organic carbon source utilization |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
|
ECO:0007082 |
colony size phenotypic evidence used in manual assertion |
CAS:9057-02-7 Pullulan |
Table 1 | ||
|
OMP_AN:37606 |
OMP:0007280 |
presence of enzymatic activity |
Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare |
ENVO:Cell Extract |
ECO:0005801 |
enzymatic activity assay evidence used in manual assertion |
UniProtKB: Q8A1G0 Neopullulanase Sus A |
Table 2 | ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 1.2 D'Elia, JN & Salyers, AA (1996) Contribution of a neopullulanase, a pullulanase, and an alpha-glucosidase to growth of Bacteroides thetaiotaomicron on starch. J Bacteriol 178 7173-9 PubMed
- ↑ 2.0 2.1 2.2 2.3 Anderson, KL & Salyers, AA (1989) Genetic evidence that outer membrane binding of starch is required for starch utilization by Bacteroides thetaiotaomicron. J Bacteriol 171 3199-204 PubMed
