Difference between revisions of "OMP ST:74680 ! Shigella flexneri 5a Sh4"

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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 
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Shigella flexneri 5a Sh4
 
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
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*Pangenome: Shigella flexneri
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*Subspecies and/or strain: 5a str. M90T
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*NCBI Taxonomy ID: [https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=1086030&lvl=3&lin=f&keep=1&srchmode=1&unlock 1086030]
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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SmR dsbA(del)::kan
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
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PMID:9673279
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
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*parent (donor):E. coli K-12 JCB571
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*parent (recipient):OMP ST:74679 ! Shigella flexneri 5a str. M90TS
 
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:27270
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OMP:0000061
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decreased virulence
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Relative to: OMP_AN:27269
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<hr>Genotype differences:<br>
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+dsbA(del)
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<hr>Condition differences:<br>
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no differences
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*temperature:37C
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*medium:fetal calf serum (10%)
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*medium:minimal essential medium
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ECO:0001165
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colony counting evidence used in manual assertion
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PMID:9673279
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Table 2
  
 
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Latest revision as of 00:52, 19 February 2019

Strain Summary

Strain Name

Shigella flexneri 5a Sh4

Synonyms
Taxon Information
  • Pangenome: Shigella flexneri
  • Subspecies and/or strain: 5a str. M90T
  • NCBI Taxonomy ID: 1086030
Genotype

SmR dsbA(del)::kan

Strain Reference

PMID:9673279[1]

Strain availability
Ancestry
Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:27270

OMP:0000061

decreased virulence

Relative to: OMP_AN:27269

Genotype differences:

+dsbA(del)

Condition differences:

no differences

  • temperature:37C
  • medium:fetal calf serum (10%)
  • medium:minimal essential medium
 ECO:0001165

colony counting evidence used in manual assertion

PMID:9673279[1]

Table 2

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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Yu, J (1998) Inactivation of DsbA, but not DsbC and DsbD, affects the intracellular survival and virulence of Shigella flexneri. Infect. Immun. 66 3909-17 PubMed OMPwiki page
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