Difference between revisions of "OMP ST:2311 ! Schizosaccharomyces pombe meu29delta"

From OMPwiki
(touch)
(Table edited by Sandyl 27 via TableEdit)
 
(11 intermediate revisions by 2 users not shown)
Line 13: Line 13:
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 +
||
 +
Schizosaccharomyces pombe meu29delta
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 +
||
 +
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 +
||
 +
*Pangenome: Schizosaccharomyces pombe
 +
*Subspecies and/or strain: meu29delta
 +
*NCBI Taxonomy ID:4896
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 +
||
 +
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 meu29delta
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 +
||
 +
PMID:20473289
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 +
||
 +
http://us.bioneer.com/products/spombe/spombeoverview.aspx
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 +
||
 +
parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 +
||
 +
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  
−
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9921.B57e0050d6c2eb&page=9921&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div>
+
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9921.B57e0050d6c2eb&page=9921&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|}
 
|}
−
<noinclude>
 
−
<!-- OMP category tags -->
 
−
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9921.B57e0050d6c2eb--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9921.B57e0050d6c2eb--></protect>
  
Line 50: Line 65:
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="V57e0050d6dec6"  class=" tableEdit OMP_annotation_table dataTable"   
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="V57e0050d6dec6"  class=" tableEdit OMP_annotation_table dataTable"   
 
|- align='left' bgcolor='#CCCCFF'
 
|- align='left' bgcolor='#CCCCFF'
−
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
+
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 +
|-
 +
|
 +
OMP_AN:2683
 +
|
 +
 
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:20473289
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:9442
 +
|
 +
 
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:13930
 +
|
 +
 
 +
|
 +
OMP:0007736
 +
|
 +
increased septation index
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:14418
 +
|
 +
 
 +
|
 +
OMP:0007755
 +
|
 +
altered actin cytoskeleton during vegetative growth
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15070
 +
|
 +
 
 +
|
 +
OMP:0007102
 +
|
 +
more rounded shape
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15098
 +
|
 +
 
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:22320
 +
|
 +
 
 +
|
 +
OMP:0007765
 +
|
 +
altered actin cortical patch localization
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:22332
 +
|
 +
 
 +
|
 +
OMP:0007761
 +
|
 +
altered microtubule cytoskeleton
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:22642
 +
|
 +
 
 +
|
 +
OMP:0007769
 +
|
 +
altered septum morphology during vegetative growth
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+meu29delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
temperature:25-32C
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9921.V57e0050d6dec6&page=9921&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9921.V57e0050d6dec6&page=9921&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|}
 
|}
−
<noinclude>
 
−
<!-- OMP category tags -->
 
−
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9921.V57e0050d6dec6--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9921.V57e0050d6dec6--></protect>
  

Latest revision as of 10:59, 9 April 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe meu29delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: meu29delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 meu29delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:2683

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:9442

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:13930

OMP:0007736

increased septation index

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14418

OMP:0007755

altered actin cytoskeleton during vegetative growth

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15070

OMP:0007102

more rounded shape

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15098

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22320

OMP:0007765

altered actin cortical patch localization

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22332

OMP:0007761

altered microtubule cytoskeleton

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22642

OMP:0007769

altered septum morphology during vegetative growth

Relative to: OMP_AN:1028

Genotype differences:

+meu29delta -h+/h+

Condition differences:

no differences

temperature:25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:2311_!_Schizosaccharomyces_pombe_meu29delta&oldid=76336"