OMP ST:2005 ! Schizosaccharomyces pombe jmj2delta: Difference between revisions

From OMPwiki
Jump to navigationJump to search
← Older edit
touch
Table edited by Sandyl 27 via TableEdit
 
(8 intermediate revisions by 2 users not shown)
Line 28: Line 28:
!align=left align='left' bgcolor='#CCCCFF' |Genotype
!align=left align='left' bgcolor='#CCCCFF' |Genotype
||
||
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32jmj2delta
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 jmj2delta
|-
|-
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
Line 49: Line 49:
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9615.K57e004635a457&page=9615&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9615.K57e004635a457&page=9615&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
|}
|}
<noinclude>
<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
</noinclude>
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9615.K57e004635a457--></protect>
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9615.K57e004635a457--></protect>


Line 68: Line 65:
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F57e004635c3b9"  class=" tableEdit OMP_annotation_table dataTable"   
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="F57e004635c3b9"  class=" tableEdit OMP_annotation_table dataTable"   
|- align='left' bgcolor='#CCCCFF'
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|-  
|-  
|
|
Line 75: Line 72:


|
|
OMP:0007392
OMP:0007460
|
|
viable cell
viable vegetative cell population
|
|
Relative to: OMP_AN:1028
Relative to: OMP_AN:1028


<hr>Genotype differences:<br>
<hr>Genotype differences:<br>
+leu1-32/leu1-32jmj2delta -leu1-32/leu1-32
+jmj2delta -h+/h+
<hr>Condition differences:<br>
<hr>Condition differences:<br>
no differences
no differences
|
temperature:25-32C
|
|
|
PMID:20473289
|
|


|
|
|-
|
OMP_AN:8339
|
|
OMP:0007460
|
viable vegetative cell population
|
Relative to: OMP_AN:1028
<hr>Genotype differences:<br>
+jmj2delta  -h+/h+
<hr>Condition differences:<br>
no differences
|
temperature:25-32C
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
|
|-
|
OMP_AN:15365
|
NOT
|
OMP:0007715
|
altered vegetative cell morphology
|
Relative to: OMP_AN:1028


<hr>Genotype differences:<br>
+jmj2delta  -h+/h+
<hr>Condition differences:<br>
no differences
|
temperature:25-32C
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
has_penetrance: FYPO_EXT:0000001 high
|
|-
|
OMP_AN:19389
|
|


|
|
PMID:20473289
OMP:0007716
|
viable vegetative cell
|
|
Relative to: OMP_AN:1028


<hr>Genotype differences:<br>
+jmj2delta  -h+/h+
<hr>Condition differences:<br>
no differences
|
temperature:25-32C
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
has_penetrance: FYPO_EXT:0000001 high
|
|
   
   
Line 101: Line 182:
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9615.F57e004635c3b9&page=9615&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.9615.F57e004635c3b9&page=9615&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
|}
|}
<noinclude>
<!-- OMP category tags -->
</noinclude>
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9615.F57e004635c3b9--></protect>
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.9615.F57e004635c3b9--></protect>


Latest revision as of 18:54, 26 February 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe jmj2delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: jmj2delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 jmj2delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:2303

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+jmj2delta -h+/h+

Condition differences:

no differences

temperature:25-32C

PMID:20473289[1]

OMP_AN:8339

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+jmj2delta -h+/h+

Condition differences:

no differences

temperature:25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15365

NOT

OMP:0007715

altered vegetative cell morphology

Relative to: OMP_AN:1028

Genotype differences:

+jmj2delta -h+/h+

Condition differences:

no differences

temperature:25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

has_penetrance: FYPO_EXT:0000001 high

OMP_AN:19389

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+jmj2delta -h+/h+

Condition differences:

no differences

temperature:25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

has_penetrance: FYPO_EXT:0000001 high


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed
  2. ↑ 2.0 2.1 2.2 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:2005_!_Schizosaccharomyces_pombe_jmj2delta&oldid=75778"