Difference between revisions of "OMP ST:5821 ! Schizosaccharomyces pombe cia1delta"

From OMPwiki
(touch)
(touch)
 
(6 intermediate revisions by 2 users not shown)
Line 49: Line 49:
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.13431.Q57e00cc4e429e&page=13431&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.13431.Q57e00cc4e429e&page=13431&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|}
 
|}
<noinclude>
 
<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.13431.Q57e00cc4e429e--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.13431.Q57e00cc4e429e--></protect>
  
Line 68: Line 65:
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K57e00cc4e5e4c"  class=" tableEdit OMP_annotation_table dataTable"   
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K57e00cc4e5e4c"  class=" tableEdit OMP_annotation_table dataTable"   
 
|- align='left' bgcolor='#CCCCFF'
 
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
+
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
|-  
 
|-  
 
|
 
|
Line 75: Line 72:
  
 
|
 
|
OMP:0007391
+
OMP:0007461
 
|
 
|
 
abolished viability
 
abolished viability
Line 82: Line 79:
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32
+
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32 -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 99: Line 96:
 
|-  
 
|-  
 
|
 
|
OMP_AN:7139
+
OMP_AN:12862
 
|
 
|
  
 
|
 
|
OMP:0007392
+
OMP:0007461
 
|
 
|
viable cell
+
nonviable vegetative cell population
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32
+
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32 -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
Line 120: Line 117:
  
 
|
 
|
PMID:20473289
+
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:18414
 +
|
 +
NOT
 +
|
 +
OMP:0007713
 +
|
 +
altered vegetative cell size
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:18808
 +
|
 +
 
 +
|
 +
OMP:0007718
 +
|
 +
abolished viability of vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:18934
 +
|
 +
 
 +
|
 +
OMP:0007708
 +
|
 +
altered vegetative cell shape
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32cia1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 
|
 
|
  
Line 129: Line 210:
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.13431.K57e00cc4e5e4c&page=13431&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.13431.K57e00cc4e5e4c&page=13431&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|}
 
|}
<noinclude>
 
<!-- OMP category tags -->
 
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.13431.K57e00cc4e5e4c--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.13431.K57e00cc4e5e4c--></protect>
  

Latest revision as of 13:18, 1 February 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe cia1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: cia1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32cia1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes



Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:7138

OMP:0007461

abolished viability

Relative to: OMP_AN:1028


Genotype differences:

+leu1-32/leu1-32cia1delta -leu1-32/leu1-32 -h+/h+


Condition differences:

no differences

PMID:20473289[1]

OMP_AN:12862

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028


Genotype differences:

+leu1-32/leu1-32cia1delta -leu1-32/leu1-32 -h+/h+


Condition differences:

no differences

PMID:23697806[2]

OMP_AN:18414

NOT

OMP:0007713

altered vegetative cell size

Relative to: OMP_AN:1028


Genotype differences:

+leu1-32/leu1-32cia1delta -leu1-32/leu1-32 -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:18808

OMP:0007718

abolished viability of vegetative cell

Relative to: OMP_AN:1028


Genotype differences:

+leu1-32/leu1-32cia1delta -leu1-32/leu1-32 -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:18934

OMP:0007708

altered vegetative cell shape

Relative to: OMP_AN:1028


Genotype differences:

+leu1-32/leu1-32cia1delta -leu1-32/leu1-32 -h+/h+


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. 2.0 2.1 2.2 2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page