Difference between revisions of "OMP ST:5040 ! Schizosaccharomyces pombe grx4delta"

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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32grx4delta
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 grx4delta
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
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OMP:0007461
 
OMP:0007461
 
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abolished viability
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nonviable vegetative cell population
 
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Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32grx4delta -leu1-32/leu1-32 -h+/h+
+
+grx4delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
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+leu1-32/leu1-32grx4delta -leu1-32/leu1-32 -h+/h+
+
+grx4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
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 +
 
 +
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 +
 
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 +
 
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PMID:23697806
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|-  
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OMP_AN:15210
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 +
 
 +
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 +
OMP:0007718
 +
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 +
abolished viability of vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+grx4delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
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 +
ECO:0001098
 +
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microscopy evidence
 +
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PMID:23697806
 +
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 +
has_penetrance: FYPO_EXT:0000003 low
 +
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 +
 +
|-
 +
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 +
OMP_AN:15211
 +
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 +
 +
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 +
OMP:0007720
 +
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 +
decreased vegetative cell volume
 +
|
 +
Relative to: OMP_AN:1028
  
 +
<hr>Genotype differences:<br>
 +
+grx4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 
|
 
|
  
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 
|
 
|
 
PMID:23697806
 
PMID:23697806
 +
|
 +
has_penetrance: FYPO_EXT:0000003 low
 +
|
 +
 +
|-
 +
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 +
OMP_AN:15212
 +
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 +
 +
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 +
OMP:0007727
 +
|
 +
tapering vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+grx4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 
|
 
|
  
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
has_penetrance: FYPO_EXT:0000003 low
 
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|
 
   
 
   
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Latest revision as of 13:29, 31 January 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe grx4delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: grx4delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 grx4delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:6151

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+grx4delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:11331

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+grx4delta -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:15210

OMP:0007718

abolished viability of vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+grx4delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

has_penetrance: FYPO_EXT:0000003 low

OMP_AN:15211

OMP:0007720

decreased vegetative cell volume

Relative to: OMP_AN:1028

Genotype differences:

+grx4delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

has_penetrance: FYPO_EXT:0000003 low

OMP_AN:15212

OMP:0007727

tapering vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+grx4delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

has_penetrance: FYPO_EXT:0000003 low


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
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