Difference between revisions of "OMP ST:2656 ! Schizosaccharomyces pombe omh6delta"

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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32omh6delta
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 omh6delta
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="J57e005ce5b928"  class=" tableEdit OMP_annotation_table dataTable"   
 
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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OMP:0007392
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OMP:0007460
 
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viable cell
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viable vegetative cell population
 
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|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32omh6delta -leu1-32/leu1-32
+
+omh6delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
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|
 
|
 
PMID:20473289
 
PMID:20473289
 +
|
 +
 +
|
 +
 +
|-
 +
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 +
OMP_AN:10331
 +
|
 +
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+omh6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 +
|
 +
 +
|
 +
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
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 +
OMP_AN:14724
 +
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 +
 +
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 +
OMP:0007718
 +
|
 +
abolished viability of vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+omh6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
temperature:low?
 +
:?
 +
|
 +
temperature:low
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:14725
 +
|
 +
 +
|
 +
OMP:0007756
 +
|
 +
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+omh6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
temperature:low?
 +
:?
 +
|
 +
temperature:low
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15142
 +
|
 +
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+omh6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15186
 +
|
 +
 +
|
 +
OMP:0007756
 +
|
 +
stubby vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+omh6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 
|
 
|
  
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Latest revision as of 11:31, 31 January 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe omh6delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: omh6delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 omh6delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:3127

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:10331

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:14724

OMP:0007718

abolished viability of vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

temperature:low?

?

temperature:low

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14725

OMP:0007756

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

temperature:low?

?

temperature:low

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15142

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15186

OMP:0007756

stubby vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+omh6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
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