Difference between revisions of "OMP ST:6361 ! Schizosaccharomyces pombe ned1delta"

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==Strain Summary==
 
==Strain Summary==
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{|  id="N5873e429c2285"  class=" tableEdit Strain_info_table" 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Schizosaccharomyces pombe ned1delta
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Schizosaccharomyces pombe
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*Subspecies and/or strain: ned1delta
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*NCBI Taxonomy ID:4896
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32ned1delta
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:20519959
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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http://us.bioneer.com/products/spombe/spombeoverview.aspx
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
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|-
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Phenotype Annotation==
 
==Phenotype Annotation==
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="K5873e429c5600"  class=" tableEdit OMP_annotation_table dataTable" 
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:7716
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|
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OMP:0007461
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abolished viability
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|
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Relative to: OMP_AN:1028
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<hr>Genotype differences:<br>
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+leu1-32/leu1-32ned1delta  -leu1-32/leu1-32 -h+/h+
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<hr>Condition differences:<br>
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no differences
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|
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|
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|
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PMID:20519959
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|
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|
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|-
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OMP_AN:8970
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|
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 +
|
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OMP:0007461
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|
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nonviable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
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<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32ned1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
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|
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OMP_AN:13426
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|
 +
 
 +
|
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OMP:0007728
 +
|
 +
altered mitotic cell cycle
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32ned1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
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|
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OMP_AN:14456
 +
|
 +
 
 +
|
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OMP:0007725
 +
|
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inviable after spore germination
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32ned1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:14566
 +
|
 +
 
 +
|
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OMP:0007740
 +
|
 +
elongated spore germ tube
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+leu1-32/leu1-32ned1delta  -leu1-32/leu1-32 -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
 
 +
|- class="tableEdit_footer"
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|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.14375.K5873e429c5600&page=14375&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
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Latest revision as of 12:02, 11 January 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe ned1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: ned1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32ned1delta

Strain Reference

PMID:20519959[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:7716

OMP:0007461

abolished viability

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32ned1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

no differences

PMID:20519959[1]

OMP_AN:8970

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32ned1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:13426

OMP:0007728

altered mitotic cell cycle

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32ned1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14456

OMP:0007725

inviable after spore germination

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32ned1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14566

OMP:0007740

elongated spore germ tube

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32ned1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Spirek, M et al. (2010) S. pombe genome deletion project: an update. Cell Cycle 9 2399-402 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:6361_!_Schizosaccharomyces_pombe_ned1delta&oldid=67916"