Difference between revisions of "OMP ST:8797 ! Bacillus subtilis 168 CAG74794"

From OMPwiki
(Page creation by SpecialNewPage)
 
(Table edited by Ypatel via TableEdit)
 
(One intermediate revision by the same user not shown)
Line 2: Line 2:
  
 
==Strain Summary==
 
==Strain Summary==
−
<newTableEdit>
+
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.15135.G59df92004f73f-->
−
Template:Strain_info_table
+
<!--
−
</newTableEdit>
+
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{|  id="G59df92004f73f"  class=" tableEdit Strain_info_table" 
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 +
||
 +
Bacillus subtilis 168 CAG74794
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 +
||
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 +
||
 +
*Pangenome: Bacillus subtilis
 +
*Subspecies and/or strain: 168
 +
*NCBI Taxonomy ID: NCBI Taxon ID: 224308
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 +
||
 +
trpC2 lacA::Pxyl-dcas9(ErmR) amyE::Pveg-sgRNA_menB(CmR)
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 +
||
 +
PMID:27238023
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 +
||
 +
 
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 +
||
 +
parent:OMP ST:796 ! Bacillus subtilis 168
 +
|-
 +
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 +
||
 +
 
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.15135.G59df92004f73f&page=15135&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 +
|}
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.15135.G59df92004f73f--></protect>
  
  
Line 11: Line 56:
  
 
==Phenotype Annotation==
 
==Phenotype Annotation==
−
<newTableEdit>
+
<protect><!--box uid=d41d8cd98f00b204e9800998ecf8427e.15135.H59df920051626-->
−
Template:OMP_annotation_table
+
<!--
−
</newTableEdit>
+
******************************************************************************************
 +
*
 +
*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **
 +
*
 +
****************************************************************************************** -->
 +
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="H59df920051626"  class=" tableEdit OMP_annotation_table dataTable" 
 +
|- align='left' bgcolor='#CCCCFF'
 +
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 +
|-
 +
|
 +
OMP_AN:13241
 +
|
 +
 
 +
|
 +
OMP:0007599
 +
|
 +
abolished population growth
 +
|
 +
Relative to: OMP_AN:13216
 +
 
 +
<hr>Genotype differences:<br>
 +
+lacA +amyE
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
*temperature:37C
 +
*medium:LB medium
 +
|
 +
ECO:0001232
 +
|
 +
microscopy evidence used in manual assertion
 +
|
 +
PMID:27238023
 +
|
 +
is_a OMP:0007682 Terminal Phenotype
 +
|
 +
 +
 
 +
|- class="tableEdit_footer"
 +
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.15135.H59df920051626&page=15135&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 +
|}
 +
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.15135.H59df920051626--></protect>
  
  

Latest revision as of 11:28, 30 November 2017

Strain Summary

Strain Name

Bacillus subtilis 168 CAG74794

Synonyms
Taxon Information
  • Pangenome: Bacillus subtilis
  • Subspecies and/or strain: 168
  • NCBI Taxonomy ID: NCBI Taxon ID: 224308
Genotype

trpC2 lacA::Pxyl-dcas9(ErmR) amyE::Pveg-sgRNA_menB(CmR)

Strain Reference

PMID:27238023[1]

Strain availability
Ancestry

parent:OMP ST:796 ! Bacillus subtilis 168

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:13241

OMP:0007599

abolished population growth

Relative to: OMP_AN:13216

Genotype differences:

+lacA +amyE

Condition differences:

no differences

  • temperature:37C
  • medium:LB medium
 ECO:0001232

microscopy evidence used in manual assertion

PMID:27238023[1]

is_aOMP:0007682 Terminal Phenotype


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Peters, JM et al. (2016) A Comprehensive, CRISPR-based Functional Analysis of Essential Genes in Bacteria. Cell 165 1493-1506 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:8797_!_Bacillus_subtilis_168_CAG74794&oldid=66209"