Difference between revisions of "OMP ST:859 ! Bacillus subtilis 168 1S10"
From OMPwiki
Andersonk282 (talk | contribs) (Table edited by Andersonk282 via TableEdit) |
m (127.0.0.1 moved page OMP ST:859 ! Strain:Bacillus subtilis 168 1S10 to OMP ST:859 ! Bacillus subtilis 168 1S10) |
||
| (4 intermediate revisions by 2 users not shown) | |||
| Line 18: | Line 18: | ||
!align=left align='left' bgcolor='#CCCCFF' |Synonyms | !align=left align='left' bgcolor='#CCCCFF' |Synonyms | ||
|| | || | ||
| − | + | SR22 | |
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information | ||
|| | || | ||
*Pangenome: Bacillus subtilis | *Pangenome: Bacillus subtilis | ||
| − | *Taxon: 168 | + | *Subspecies and/or strain: Taxon: 168 |
| − | *NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=224308&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 224308] | + | *NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=224308&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 224308] |
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Genotype | !align=left align='left' bgcolor='#CCCCFF' |Genotype | ||
|| | || | ||
| − | + | spo0A12 trpC2 | |
| − | |||
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference | ||
| Line 35: | Line 34: | ||
PMID:4994039 | PMID:4994039 | ||
|- | |- | ||
| − | !align=left align='left' bgcolor='#CCCCFF' | | + | !align=left align='left' bgcolor='#CCCCFF' |Strain availability |
|| | || | ||
[http://www.bgsc.org/viewdetail.php?bgscid=1S10&Search=spo0A Bacillus Genetic Stock Center] | [http://www.bgsc.org/viewdetail.php?bgscid=1S10&Search=spo0A Bacillus Genetic Stock Center] | ||
| Line 48: | Line 47: | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
| − | |< | + | |<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6660.T55ae9a39c914a&page=6660&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> || |
|} | |} | ||
<noinclude> | <noinclude> | ||
| − | + | <!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]] | |
</noinclude> | </noinclude> | ||
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6660.T55ae9a39c914a--></protect> | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.6660.T55ae9a39c914a--></protect> | ||
| Line 66: | Line 65: | ||
* | * | ||
****************************************************************************************** --> | ****************************************************************************************** --> | ||
| − | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="L55ae9a39cec44" class=" tableEdit OMP_annotation_table" | + | {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;" id="L55ae9a39cec44" class=" tableEdit OMP_annotation_table dataTable" |
|- align='left' bgcolor='#CCCCFF' | |- align='left' bgcolor='#CCCCFF' | ||
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | !|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | ||
| Line 79: | Line 78: | ||
presence of endospore formation | presence of endospore formation | ||
| | | | ||
| − | Relative to: | + | Relative to: OMP_AN:147 |
| − | < | + | |
| − | Genotype differences:<br> | + | <hr>Genotype differences:<br> |
| − | + | +spo0A12 +trpC2 -other:trpC2 | |
| − | Condition differences:<br> | + | <hr>Condition differences:<br> |
| − | + | medium:MnCl2 (0.01 mM);minimal glucose mediumMnCl<sub>2</sub> (0.01 mM);[[Minimal medium of Spizizen|glucose minimal medium]] | |
| | | | ||
*temperature:37C | *temperature:37C | ||
| Line 102: | Line 101: | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
| − | |< | + | |<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6660.L55ae9a39cec44&page=6660&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || || |
|} | |} | ||
<noinclude> | <noinclude> | ||
| − | + | <!-- OMP category tags --> | |
</noinclude> | </noinclude> | ||
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6660.L55ae9a39cec44--></protect> | <!--box uid=d41d8cd98f00b204e9800998ecf8427e.6660.L55ae9a39cec44--></protect> | ||
Latest revision as of 14:06, 21 June 2016
Contents
Strain Summary
| Strain Name |
1S10 |
|---|---|
| Synonyms |
SR22 |
| Taxon Information |
|
| Genotype |
spo0A12 trpC2 |
| Strain Reference | |
| Strain availability | |
| Ancestry |
ancestor:Bacillus subtilis 168 |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | not | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:298 |
OMP:0000017 |
presence of endospore formation |
Relative to: OMP_AN:147 Genotype differences: +spo0A12 +trpC2 -other:trpC2 Condition differences: medium:MnCl2 (0.01 mM);minimal glucose mediumMnCl2 (0.01 mM);glucose minimal medium |
|
ECO:0000182 |
in vitro culture assay evidence |
| |||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 Hoch, JA (1971) Genetic analysis of pleiotropic negative sporulation mutants in Bacillus subtilis. J. Bacteriol. 105 896-901 PubMed OMPwiki page
- ↑ Spizizen, J (1958) TRANSFORMATION OF BIOCHEMICALLY DEFICIENT STRAINS OF BACILLUS SUBTILIS BY DEOXYRIBONUCLEATE. Proc. Natl. Acad. Sci. U.S.A. 44 1072-8 PubMed OMPwiki page
