Difference between revisions of "OMP ST:823 ! Bacillus subtilis 168 1S50"

From OMPwiki
(Table edited by Andersonk282 via TableEdit)
 
(9 intermediate revisions by 2 users not shown)
Line 18: Line 18:
 
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
||
 
||
 
+
89
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
||
 
||
 
*Pangenome: Bacillus subtilis
 
*Pangenome: Bacillus subtilis
*Taxon: 168
+
*Subspecies and/or strain: Taxon: 168
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
||
 
||
*other:spoVA89
+
spoVA89 trpC2
*other:trpC2
 
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
Line 35: Line 34:
 
*PMID:4212352
 
*PMID:4212352
 
|-
 
|-
!align=left align='left' bgcolor='#CCCCFF' |Source
+
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
||
 
||
 
[http://www.bgsc.org/viewdetail.php?bgscid=1S50&Search=spoVA Bacillus Genetic Stock Center]
 
[http://www.bgsc.org/viewdetail.php?bgscid=1S50&Search=spoVA Bacillus Genetic Stock Center]
Line 41: Line 40:
 
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
||
 
||
 
+
ancestor:Bacillus subtilis 168
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
Line 48: Line 47:
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6585.B55a41a9ce80d0&page=6585&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</span> ||
+
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6585.B55a41a9ce80d0&page=6585&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|}
 
|}
 
<noinclude>
 
<noinclude>
 
+
<!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]]
 
</noinclude>
 
</noinclude>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6585.B55a41a9ce80d0--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6585.B55a41a9ce80d0--></protect>
Line 66: Line 65:
 
*  
 
*  
 
****************************************************************************************** -->
 
****************************************************************************************** -->
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A55a41a9ceb24d"  class=" tableEdit OMP_annotation_table"   
+
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="A55a41a9ceb24d"  class=" tableEdit OMP_annotation_table dataTable"   
 
|- align='left' bgcolor='#CCCCFF'
 
|- align='left' bgcolor='#CCCCFF'
 
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
Line 79: Line 78:
 
endospore formation stopped at stage V
 
endospore formation stopped at stage V
 
|
 
|
Relative to:
+
Relative to: OMP_AN:243
<br>
+
 
Genotype differences:<br>
+
<hr>Genotype differences:<br>
Nothing to compare<br/><br>
+
+spoVA89 +trpC2  -other:trpC2
Condition differences:<br>
+
<hr>Condition differences:<br>
Nothing to compare<br/>
+
no differences
 
|
 
|
 
*temperature:37C
 
*temperature:37C
*medium:minimal medium
+
*medium:[[Lactate minimal medium of Donnellan,Nags, and Levinson| lactate minimal medium]]
 
|
 
|
 
ECO:0001098
 
ECO:0001098
Line 100: Line 99:
  
 
|- class="tableEdit_footer"  
 
|- class="tableEdit_footer"  
|<span class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6585.A55a41a9ceb24d&page=6585&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</span> || || || || || || || || || ||
+
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.6585.A55a41a9ceb24d&page=6585&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|}
 
|}
 
<noinclude>
 
<noinclude>
 
+
<!-- OMP category tags -->
 
</noinclude>
 
</noinclude>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6585.A55a41a9ceb24d--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.6585.A55a41a9ceb24d--></protect>

Latest revision as of 14:06, 21 June 2016

Strain Summary

Strain Name

1S50

Synonyms

89

Taxon Information
  • Pangenome: Bacillus subtilis
  • Subspecies and/or strain: Taxon: 168
Genotype

spoVA89 trpC2

Strain Reference
Strain availability

Bacillus Genetic Stock Center

Ancestry

ancestor:Bacillus subtilis 168

Annotated phenotypes


Notes

Phenotype Annotation

Showing 1 to 1 of 1 entries
Annotation IDnotOMP IDOMP term nameRelative phenotype informationExperimental conditionECO IDECO term nameReferenceAnnotation ExtensionNotes

OMP_AN:244

OMP:0008022

endospore formation stopped at stage V

Relative to: OMP_AN:243


Genotype differences:

+spoVA89 +trpC2 -other:trpC2


Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:4212352[1]

still researching the makeup of the minimal medium

Showing 1 to 1 of 1 entries



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Jump up to: 1.0 1.1 Hranueli, D et al. (1974) Statistical estimate of the total number of operons specific for Bacillus subtilis sporulation. J. Bacteriol. 119 684-90 PubMed OMPwiki page