Difference between revisions of "OMP ST:799 ! Burkholderia contaminans MS14 MS14MT24"

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*Pangenome: Burkholderia contaminans
 
*Pangenome: Burkholderia contaminans
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*Taxon: MS14
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*Subspecies and/or strain: Taxon: MS14
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*NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
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*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=488447&lvl=3&p=mapview&p=has_linkout&p=blast_url&p=genome_blast&lin=f&keep=1&srchmode=1&unlock 488447]
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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other:ocfH::Tn5
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ocfH::Tn5
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
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PMID:21742901
 
PMID:21742901
 
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
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OMP:0006178
 
OMP:0006178
 
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abolished antimicrobial peptide production
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Relative to: OMP_AN:89
  
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<hr>Genotype differences:<br>
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+other:ocfH::Tn5  -
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<hr>Condition differences:<br>
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no differences
 
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Relative to:
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*other:Indicator fungus-''Geotrichum candidum''
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<br>
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*temperature:25 C
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Genotype differences:<br>
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*medium:100 mL PDA
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Nothing to compare<br/><br>
 
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Condition differences:<br>
 
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Nothing to compare<br/>
 
 
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ECO:0000182
 
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in vitro culture assay evidence
 
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PMID:21742901
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==References==
 
==References==
 
{{RefHelp}}<references/>
 
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[[Category:Strain:Burkholderia contaminans MS14]]

Latest revision as of 14:06, 21 June 2016

Strain Summary

Strain Name

MS14MT24

Synonyms
Taxon Information
  • Pangenome: Burkholderia contaminans
  • Subspecies and/or strain: Taxon: MS14
  • NCBI Taxonomy ID: NCBI Taxon ID: 488447
Genotype

ocfH::Tn5

Strain Reference

PMID:21742901[1]

Strain availability
Ancestry

parent:MS14

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:113

OMP:0006178

abolished antimicrobial peptide production

Relative to: OMP_AN:89

Genotype differences:

+other:ocfH::Tn5 -

Condition differences:

no differences

  • other:Indicator fungus-Geotrichum candidum
  • temperature:25 C
  • medium:100 mL PDA
 ECO:0000182

in vitro culture assay evidence

PMID:21742901[1]


edit table



Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Gu, G et al. (2011) Genetic and biochemical map for the biosynthesis of occidiofungin, an antifungal produced by Burkholderia contaminans strain MS14. Appl. Environ. Microbiol. 77 6189-98 PubMed OMPwiki page
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