Difference between revisions of "OMP ST:4363 ! Schizosaccharomyces pombe pck2delta"

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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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−
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32pck2delta
+
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 pck2delta
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
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*  ** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
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** PLEASE DON'T EDIT THIS TABLE DIRECTLY.  Use the edit table link under the table. **  
 
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OMP:0007460
 
OMP:0007460
 
|
 
|
−
viable cell
+
viable vegetative cell population
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32pck2delta -leu1-32/leu1-32 -h+/h+
+
+pck2delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32pck2delta -leu1-32/leu1-32 -h+/h+
+
+pck2delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
temperature:25-32C?
 +
:?
 
|
 
|
−
 
+
temperature:25-32C
 
|
 
|
  
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32pck2delta -leu1-32/leu1-32 -h+/h+
+
+pck2delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
temperature:above 32C?
 +
:?
 +
|
 +
temperature:above 32C
 +
|
 +
 
 +
|
 +
 
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:13364
 +
|
 +
 
 +
|
 +
OMP:0007718
 +
|
 +
 
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+pck2delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
temperature:25-32C?
 +
:?
 +
|
 +
temperature:25-32C
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15079
 +
|
 +
 
 +
|
 +
OMP:0007102
 +
|
 +
more rounded cell shape
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+pck2delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
   
 +
|-  
 +
|
 +
OMP_AN:15107
 +
|
 +
 
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+pck2delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-  
 +
|
 +
OMP_AN:16818
 +
|
 +
NOT
 +
|
 +
OMP:0007715
 +
|
 +
altered vegetative cell morphology
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+pck2delta  -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
 
|
 
|
  
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 
|
 
|
  
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:20842
 
|
 
|
  
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+pck2delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 
|
 
|
 
PMID:23697806
 
PMID:23697806
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Latest revision as of 19:34, 12 September 2019

Strain Summary

Strain Name

Schizosaccharomyces pombe pck2delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: pck2delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 pck2delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:5279

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:10652

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

temperature:25-32C?

?

temperature:25-32C

PMID:23697806[2]

OMP_AN:10653

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

temperature:above 32C?

?

temperature:above 32C

PMID:23697806[2]

OMP_AN:13364

OMP:0007718

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

temperature:25-32C?

?

temperature:25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15079

OMP:0007102

more rounded cell shape

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15107

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:16818

NOT

OMP:0007715

altered vegetative cell morphology

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:20842

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+pck2delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
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