Difference between revisions of "OMP ST:74683 ! Shigella flexneri 5a Sh12"

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==Strain Summary==
 
==Strain Summary==
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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Shigella flexneri 5a Sh12
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Shigella flexneri
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*Subspecies and/or strain: 5a str. M90T
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*NCBI Taxonomy ID: [https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=1086030&lvl=3&lin=f&keep=1&srchmode=1&unlock 1086030]
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
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SmR dsbD(del)::kan
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:9673279
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent:OMP ST:74679 ! Shigella flexneri 5a str. M90TS
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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==Phenotype Annotation==
 
==Phenotype Annotation==
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="I5c6b585670e7e"  class=" tableEdit OMP_annotation_table dataTable" 
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:27272
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OMP:0007284
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presence of virulence
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Relative to:
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<hr>Genotype differences:<br>
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Nothing to compare<br/>
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<hr>Condition differences:<br>
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Nothing to compare<br/>
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*temperature:37C
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*medium:fetal calf serum (10%)
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*medium:minimal essential medium
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ECO:0001165
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colony counting evidence used in manual assertion
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PMID:9673279
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Table 2
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Latest revision as of 23:54, 18 February 2019

Strain Summary

Strain Name

Shigella flexneri 5a Sh12

Synonyms
Taxon Information
  • Pangenome: Shigella flexneri
  • Subspecies and/or strain: 5a str. M90T
  • NCBI Taxonomy ID: 1086030
Genotype

SmR dsbD(del)::kan

Strain Reference

PMID:9673279[1]

Strain availability
Ancestry

parent:OMP ST:74679 ! Shigella flexneri 5a str. M90TS

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:27272

OMP:0007284

presence of virulence

Relative to:

Genotype differences:

Nothing to compare

Condition differences:

Nothing to compare
  • temperature:37C
  • medium:fetal calf serum (10%)
  • medium:minimal essential medium
 ECO:0001165

colony counting evidence used in manual assertion

PMID:9673279[1]

Table 2

edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Yu, J (1998) Inactivation of DsbA, but not DsbC and DsbD, affects the intracellular survival and virulence of Shigella flexneri. Infect. Immun. 66 3909-17 PubMed OMPwiki page
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