Difference between revisions of "OMP ST:4452 ! Schizosaccharomyces pombe alp4delta"

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!align=left align='left' bgcolor='#CCCCFF' |Strain Name
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Name
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Schizosaccharomyces pombe alp4delta
 
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!align=left align='left' bgcolor='#CCCCFF' |Synonyms
 
!align=left align='left' bgcolor='#CCCCFF' |Synonyms
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
 
!align=left align='left' bgcolor='#CCCCFF' |Taxon Information
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*Pangenome: Schizosaccharomyces pombe
 +
*Subspecies and/or strain: alp4delta
 +
*NCBI Taxonomy ID:4896
 
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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 alp4delta
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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PMID:20473289
 
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!align=left align='left' bgcolor='#CCCCFF' |Strain availability
 
!align=left align='left' bgcolor='#CCCCFF' |Strain availability
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http://us.bioneer.com/products/spombe/spombeoverview.aspx
 
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!align=left align='left' bgcolor='#CCCCFF' |Ancestry
 
!align=left align='left' bgcolor='#CCCCFF' |Ancestry
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parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
 
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!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
 
!align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
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{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="S57e009be873fb"  class=" tableEdit OMP_annotation_table dataTable"   
 
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!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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|-
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OMP_AN:5386
 +
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OMP:0007461
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nonviable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
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<hr>Genotype differences:<br>
 +
+alp4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
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 +
 
 +
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 +
 
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PMID:20473289
 +
|
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|-
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OMP_AN:11624
 +
|
 +
 
 +
|
 +
OMP:0007461
 +
|
 +
nonviable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+alp4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
 
 +
|
 +
 
 +
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 +
PMID:23697806
 +
|
 +
 
 +
|
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|-
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 +
OMP_AN:14698
 +
|
 +
 
 +
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 +
OMP:0007718
 +
|
 +
abolished viability of vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+alp4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
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 +
OMP_AN:14699
 +
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 +
 
 +
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 +
OMP:0007714
 +
|
 +
curving vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+alp4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
no differences
 +
|
 +
 
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
 +
|-
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 +
OMP_AN:27244
 +
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 +
 
 +
|
 +
OMP:0007816
 +
|
 +
 
 +
|
 +
Relative to: OMP_AN:1028
 +
 
 +
<hr>Genotype differences:<br>
 +
+alp4delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
medium:YES?
 +
|
 +
*temperature:25-32C
 +
*medium:YES
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 
 +
|
 +
  
 
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Latest revision as of 11:05, 25 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe alp4delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: alp4delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 alp4delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Showing 1 to 5 of 5 entries
Annotation IDQualifierOMP IDOMP term nameRelative phenotype informationExperimental conditionECO IDECO term nameReferenceAnnotation ExtensionNotes

OMP_AN:11624

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+alp4delta -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:14698

OMP:0007718

abolished viability of vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+alp4delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14699

OMP:0007714

curving vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+alp4delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:27244

OMP:0007816

Relative to: OMP_AN:1028

Genotype differences:

+alp4delta -h+/h+

Condition differences:

medium:YES?

  • temperature:25-32C
  • medium:YES
 ECO:0001098

microscopy evidence

PMID:23697806[2]


OMP_AN:5386

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+alp4delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

Showing 1 to 5 of 5 entries
edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ Jump up to: 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ Jump up to: 2.0 2.1 2.2 2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
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