Difference between revisions of "OMP ST:3292 ! Schizosaccharomyces pombe SPAC22E12.02delta"

From OMPwiki
(touch)
(Table edited by Sandyl 27 via TableEdit)
 
(6 intermediate revisions by 2 users not shown)
Line 28: Line 28:
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
||
 
||
−
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32SPAC22E12.02delta
+
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 SPAC22E12.02delta
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
Line 49: Line 49:
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.10902.J57e00730b228a&page=10902&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.10902.J57e00730b228a&page=10902&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 
|}
 
|}
−
<noinclude>
 
−
<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
−
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.10902.J57e00730b228a--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.10902.J57e00730b228a--></protect>
  
Line 68: Line 65:
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="P57e00730b3d54"  class=" tableEdit OMP_annotation_table dataTable"   
 
{| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="P57e00730b3d54"  class=" tableEdit OMP_annotation_table dataTable"   
 
|- align='left' bgcolor='#CCCCFF'
 
|- align='left' bgcolor='#CCCCFF'
−
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
+
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
|-  
 
|-  
 
|
 
|
Line 75: Line 72:
  
 
|
 
|
−
OMP:0007391
+
OMP:0007461
 
|
 
|
−
abolished viability
+
nonviable vegetative cell population
 
|
 
|
 
Relative to: OMP_AN:1028
 
Relative to: OMP_AN:1028
  
 
<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32SPAC22E12.02delta  -leu1-32/leu1-32
+
+SPAC22E12.02delta  -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
Line 93: Line 91:
 
|
 
|
 
PMID:20473289
 
PMID:20473289
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:9206
 +
|
 +
 +
|
 +
OMP:0007461
 +
|
 +
nonviable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+SPAC22E12.02delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
 +
|
 +
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:13449
 +
|
 +
 +
|
 +
OMP:0007728
 +
|
 +
altered mitotic cell cycle
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+SPAC22E12.02delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:27242
 +
|
 +
 +
|
 +
OMP:0007816
 +
|
 +
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+SPAC22E12.02delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
medium:YES?
 +
|
 +
*temperature:25-32C
 +
*medium:YES
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 
|
 
|
  
Line 101: Line 186:
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.10902.P57e00730b3d54&page=10902&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.10902.P57e00730b3d54&page=10902&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 
|}
 
|}
−
<noinclude>
 
−
<!-- OMP category tags -->
 
−
</noinclude>
 
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.10902.P57e00730b3d54--></protect>
 
<!--box uid=d41d8cd98f00b204e9800998ecf8427e.10902.P57e00730b3d54--></protect>
  

Latest revision as of 09:56, 25 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe SPAC22E12.02delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: SPAC22E12.02delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 SPAC22E12.02delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:3923

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+SPAC22E12.02delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:9206

OMP:0007461

nonviable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+SPAC22E12.02delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:13449

OMP:0007728

altered mitotic cell cycle

Relative to: OMP_AN:1028

Genotype differences:

+SPAC22E12.02delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:27242

OMP:0007816

Relative to: OMP_AN:1028

Genotype differences:

+SPAC22E12.02delta -h+/h+

Condition differences:

medium:YES?

  • temperature:25-32C
  • medium:YES
 ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:3292_!_Schizosaccharomyces_pombe_SPAC22E12.02delta&oldid=117794"