Difference between revisions of "OMP ST:2959 ! Schizosaccharomyces pombe mrc1delta"

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(Table edited by Sandyl 27 via TableEdit)
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32mrc1delta -leu1-32/leu1-32 -h+/h+
+
+mrc1delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32mrc1delta -leu1-32/leu1-32 -h+/h+
+
+mrc1delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32mrc1delta -leu1-32/leu1-32 -h+/h+
+
+mrc1delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32mrc1delta -leu1-32/leu1-32 -h+/h+
+
+mrc1delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
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|
 
|
 
PMID:23697806
 
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:26707
 +
|
 +
 +
|
 +
OMP:0007782
 +
|
 +
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+mrc1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
other:hydroxyurea?
 +
temperature:?25-32C
 +
|
 +
other:hydroxyurea
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
CHEBI:44423 hydroxyurea
 +
 +
has_penetrance: FYPO_EXT:0000002 medium
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:27186
 +
|
 +
 +
|
 +
OMP:0007806
 +
|
 +
increased cell population viability upon nitrogen starvation
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+mrc1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
medium:glucose MM, no nitrogen;agar plates?
 +
|
 +
*temperature:25-32C
 +
*medium:glucose MM, no nitrogen
 +
*medium:agar plates
 +
|
 +
ECO:0001563
 +
|
 +
cell growth assay evidence
 +
|
 +
PMID:25452419
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:27231
 +
|
 +
 +
|
 +
OMP:0007806
 +
|
 +
increased cell population viability upon nitrogen starvation
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+mrc1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
medium:glucose MM, no nitrogen?
 +
|
 +
*temperature:25-32C
 +
*medium:glucose MM, no nitrogen
 +
|
 +
ECO:0007147
 +
|
 +
competitive growth assay evidence used in manual assertion
 +
|
 +
PMID:25452419
 
|
 
|
  

Latest revision as of 15:15, 20 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe mrc1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: mrc1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 mrc1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


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Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:3502

OMP:0007460

viable cell

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:10119

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:16471

NOT

OMP:0007715

altered vegetative cell morphology

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:20495

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:26707

OMP:0007782

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:

other:hydroxyurea? temperature:?25-32C

other:hydroxyurea

ECO:0001098

microscopy evidence

PMID:23697806[2]

CHEBI:44423 hydroxyurea

has_penetrance: FYPO_EXT:0000002 medium

OMP_AN:27186

OMP:0007806

increased cell population viability upon nitrogen starvation

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:

medium:glucose MM, no nitrogen;agar plates?

  • temperature:25-32C
  • medium:glucose MM, no nitrogen
  • medium:agar plates
 ECO:0001563

cell growth assay evidence

PMID:25452419[3]

OMP_AN:27231

OMP:0007806

increased cell population viability upon nitrogen starvation

Relative to: OMP_AN:1028

Genotype differences:

+mrc1delta -h+/h+

Condition differences:

medium:glucose MM, no nitrogen?

  • temperature:25-32C
  • medium:glucose MM, no nitrogen
 ECO:0007147

competitive growth assay evidence used in manual assertion

PMID:25452419[3]


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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
  3. ↑ 3.0 3.1 Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed OMPwiki page
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