OMP ST:3616 ! Schizosaccharomyces pombe pka1delta: Difference between revisions

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|- align='left' bgcolor='#CCCCFF'
|- align='left' bgcolor='#CCCCFF'
!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
|-
|
OMP_AN:4313
|
 
|
OMP:0007460
|
viable cell
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32pka1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
 
|
 
|
PMID:20473289
|
 
|
|-
|
OMP_AN:10519
|
 
|
OMP:0007460
|
viable vegetative cell population
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32pka1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
 
|
 
|
PMID:23697806
|
 
|
|-
|
OMP_AN:15047
|
 
|
OMP:0007716
|
viable vegetative cell
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32pka1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:15057
|
 
|
OMP:0007720
|
decreased vegetative cell volume
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32pka1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
:?
temperature:?25-32C
|
 
|
ECO:0001098
|
microscopy evidence
|
PMID:23697806
|
 
|
|-
|
OMP_AN:27163
|
 
|
OMP:0007806
|
increased cell population viability upon nitrogen starvation
|
Relative to: OMP_AN:1028
 
<hr>Genotype differences:<br>
+leu1-32/leu1-32pka1delta  -leu1-32/leu1-32 -h+/h+
<hr>Condition differences:<br>
medium:glucose MM, no nitrogen;agar plates?
|
*temperature:25-32C
*medium:glucose MM, no nitrogen
*medium:agar plates
|
ECO:0001563
|
cell growth assay evidence
|
PMID:25452419
|
 
|


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Latest revision as of 20:48, 20 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe pka1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: pka1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32pka1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:4313

OMP:0007460

viable cell

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32pka1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:10519

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32pka1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:15047

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32pka1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15057

OMP:0007720

decreased vegetative cell volume

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32pka1delta -leu1-32/leu1-32 -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:27163

OMP:0007806

increased cell population viability upon nitrogen starvation

Relative to: OMP_AN:1028

Genotype differences:

+leu1-32/leu1-32pka1delta -leu1-32/leu1-32 -h+/h+

Condition differences:

medium:glucose MM, no nitrogen;agar plates?

  • temperature:25-32C
  • medium:glucose MM, no nitrogen
  • medium:agar plates
 ECO:0001563

cell growth assay evidence

PMID:25452419[3]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed
  2. ↑ 2.0 2.1 2.2 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed
  3. ↑ Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed
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