OMP ST:4352 ! Schizosaccharomyces pombe SPBC16H5.08cdelta: Difference between revisions

Latest revision as of 19:47, 20 June 2018

Strain Summary

Strain Name	Schizosaccharomyces pombe SPBC16H5.08cdelta
Synonyms
Taxon Information	Pangenome: Schizosaccharomyces pombe Subspecies and/or strain: SPBC16H5.08cdelta NCBI Taxonomy ID:4896
Genotype	ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32SPBC16H5.08cdelta
Strain Reference	PMID:20473289^[1]
Strain availability	http://us.bioneer.com/products/spombe/spombeoverview.aspx
Ancestry	parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286
Annotated phenotypes
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Notes

Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference
OMP_AN:5264		OMP:0007460	viable cell	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: ? temperature:?25-32C				PMID:20473289^[1]
OMP_AN:10912		OMP:0007460	viable vegetative cell population	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: ? temperature:?25-32C				PMID:23697806^[2]
OMP_AN:18542	NOT	OMP:0007713	altered vegetative cell size	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: ? temperature:?25-32C		ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:19062		OMP:0007708	altered vegetative cell shape	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: ? temperature:?25-32C		ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:19278		OMP:0007716	viable vegetative cell	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: ? temperature:?25-32C		ECO:0001098	microscopy evidence	PMID:23697806^[2]
OMP_AN:27108		OMP:0007803	decreased vegetative cell population growth rate	Relative to: OMP_AN:1028 Genotype differences: +leu1-32/leu1-32SPBC16H5.08cdelta -leu1-32/leu1-32 -h+/h+ Condition differences: medium:glucose MM?	temperature:25-32C medium:glucose MM	ECO:0007147	competitive growth assay evidence used in manual assertion	PMID:25452419^[3]
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Additional Information

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References

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↑ ^1.0 ^1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed
↑ ^2.0 ^2.1 ^2.2 ^2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed
↑ Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed

[PMID:20473289-1] 1.0 ^1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed

[PMID:23697806-2] 2.0 ^2.1 ^2.2 ^2.3 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed

[PMID:25452419-3] Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed

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OMP ST:4352 ! Schizosaccharomyces pombe SPBC16H5.08cdelta: Difference between revisions

Latest revision as of 19:47, 20 June 2018

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Strain Summary

Notes

Phenotype Annotation

Additional Information

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References

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@@ Line 81: / Line 81: @@
 +leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
 <hr>Condition differences:<br>
-no differences
+:?
+temperature:?25-32C
 |
@@ Line 109: / Line 110: @@
 +leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
 <hr>Condition differences:<br>
-no differences
+:?
+temperature:?25-32C
 |
@@ Line 137: / Line 139: @@
 +leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
 <hr>Condition differences:<br>
-no differences
+:?
+temperature:?25-32C
 |
@@ Line 146: / Line 149: @@
 |
 PMID:23697806
+|
+|
+|-
+|
+OMP_AN:19062
+|
+|
+OMP:0007708
+|
+altered vegetative cell shape
+|
+Relative to: OMP_AN:1028
+<hr>Genotype differences:<br>
++leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
+<hr>Condition differences:<br>
+:?
+temperature:?25-32C
+|
+|
+ECO:0001098
+|
+microscopy evidence
+|
+PMID:23697806
+|
+|
+|-
+|
+OMP_AN:19278
+|
+|
+OMP:0007716
+|
+viable vegetative cell
+|
+Relative to: OMP_AN:1028
+<hr>Genotype differences:<br>
++leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
+<hr>Condition differences:<br>
+:?
+temperature:?25-32C
+|
+|
+ECO:0001098
+|
+microscopy evidence
+|
+PMID:23697806
+|
+|
+|-
+|
+OMP_AN:27108
+|
+|
+OMP:0007803
+|
+decreased vegetative cell population growth rate
+|
+Relative to: OMP_AN:1028
+<hr>Genotype differences:<br>
++leu1-32/leu1-32SPBC16H5.08cdelta  -leu1-32/leu1-32 -h+/h+
+<hr>Condition differences:<br>
+medium:glucose MM?
+|
+*temperature:25-32C
+*medium:glucose MM
+|
+ECO:0007147
+|
+competitive growth assay evidence used in manual assertion
+|
+PMID:25452419
 |