Difference between revisions of "OMP ST:5136 ! Schizosaccharomyces pombe alg6delta"

From OMPwiki
(touch)
(Table edited by Sandyl 27 via TableEdit)
 
(2 intermediate revisions by the same user not shown)
Line 137: Line 137:
 
+alg6delta  -h+/h+
 
+alg6delta  -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
temperature:above ~32 degrees Celsius ?
 +
:?
 
|
 
|
−
 
+
temperature:above ~32 degrees Celsius
 
|
 
|
 
ECO:0001098
 
ECO:0001098
Line 165: Line 166:
 
+alg6delta  -h+/h+
 
+alg6delta  -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
temperature:above ~32 degrees Celsius ?
 +
:?
 
|
 
|
−
 
+
temperature:above ~32 degrees Celsius
 
|
 
|
 
ECO:0001098
 
ECO:0001098
Line 278: Line 280:
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
 
no differences
 
no differences
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:22643
 +
|
 +
 +
|
 +
OMP:0007769
 +
|
 +
altered septum morphology during vegetative growth
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+alg6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
temperature:above ~32 degrees Celsius25-32C
 +
|
 +
temperature:above ~32 degrees Celsius
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:26676
 +
|
 +
 +
|
 +
OMP:0007799
 +
|
 +
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+alg6delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 
|
 
|
  

Latest revision as of 12:53, 14 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe alg6delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: alg6delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 alg6delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:6277

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

PMID:20473289[1]

OMP_AN:11577

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

PMID:23697806[2]

OMP_AN:13931

OMP:0007736

increased septation index

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

temperature:above ~32 degrees Celsius ?

?

temperature:above ~32 degrees Celsius

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:14419

OMP:0007755

altered actin cytoskeleton during vegetative growth

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

temperature:above ~32 degrees Celsius ?

?

temperature:above ~32 degrees Celsius

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15151

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15195

OMP:0007756

stubby vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22321

OMP:0007765

altered actin cortical patch localization

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22333

OMP:0007761

altered microtubule cytoskeleton

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

no differences

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:22643

OMP:0007769

altered septum morphology during vegetative growth

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:

temperature:above ~32 degrees Celsius25-32C

temperature:above ~32 degrees Celsius

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:26676

OMP:0007799

Relative to: OMP_AN:1028

Genotype differences:

+alg6delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 2.6 2.7 2.8 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
Retrieved from "https://microbialphenotypes.org/wiki/index.php?title=OMP_ST:5136_!_Schizosaccharomyces_pombe_alg6delta&oldid=116130"