Category:Biofilms

This category contains publications about biofilms. For methods related to biofilms see Category:Biofilm Assays.

• Adnan, M, Morton, G, Hadi, S (2011) Analysis of rpoS and bolA gene expression under various stress-induced environments in planktonic and biofilm phase using 2(-ΔΔCT) method. Mol. Cell. Biochem. 357 275-82 PMID:21630090
• Allsopp, LP, Beloin, C, Ulett, GC, Valle, J, Totsika, M, Sherlock, O, Ghigo, JM, Schembri, MA (2012) Molecular characterization of UpaB and UpaC, two new autotransporter proteins of uropathogenic Escherichia coli CFT073. Infect. Immun. 80 321-32 PMID:21930758
• An, YH, McGlohorn, JB, Bednarski, BK, Martin, KL, Friedman, RJ (2001) An open channel flow chamber for characterizing biofilm formation on biomaterial surfaces. Meth. Enzymol. 337 79-88 PMID:11398453
• Baty, AM 3rd, Diwu, Z, Dunham, G, Eastburn, CC, Geesey, GG, Goodman, AE, Suci, PA, Techkarnjanaruk, S (2001) Characterization of extracellular chitinolytic activity in biofilms. Meth. Enzymol. 336 279-301 PMID:11398405
• Cramton, SE, Gerke, C, Götz, F (2001) In vitro methods to study staphylococcal biofilm formation. Meth. Enzymol. 336 239-55 PMID:11398402
• Domka, J, Lee, J, Wood, TK (2006) YliH (BssR) and YceP (BssS) regulate Escherichia coli K-12 biofilm formation by influencing cell signaling. Appl. Environ. Microbiol. 72 2449-59 PMID:16597943
• Harrison, JJ, Wade, WD, Akierman, S, Vacchi-Suzzi, C, Stremick, CA, Turner, RJ, Ceri, H (2009) The chromosomal toxin gene yafQ is a determinant of multidrug tolerance for Escherichia coli growing in a biofilm. Antimicrob. Agents Chemother. 53 2253-8 PMID:19307375
• Heydorn, A, Nielsen, AT, Hentzer, M, Sternberg, C, Givskov, M, Ersbøll, BK, Molin, S (2000) Quantification of biofilm structures by the novel computer program COMSTAT. Microbiology (Reading, Engl.) 146 ( Pt 10) 2395-407 PMID:11021916
• Ito, A, May, T, Kawata, K, Okabe, S (2008) Significance of rpoS during maturation of Escherichia coli biofilms. Biotechnol. Bioeng. 99 1462-71 PMID:17979199
• Kawabata, S, Hamada, S (1999) Studying biofilm formation of mutans streptococci. Meth. Enzymol. 310 513-23 PMID:10547815
• Lee, J, Jayaraman, A, Wood, TK (2007) Indole is an inter-species biofilm signal mediated by SdiA. BMC Microbiol. 7 42 PMID:17511876
• Lee, J, Maeda, T, Hong, SH, Wood, TK (2009) Reconfiguring the quorum-sensing regulator SdiA of Escherichia coli to control biofilm formation via indole and N-acylhomoserine lactones. Appl. Environ. Microbiol. 75 1703-16 PMID:19168658
• Manz, W, Wagner, M, Kalmbach, S (2001) Assessment of metabolic potential of biofilm-associated bacteria. Meth. Enzymol. 336 265-76 PMID:11398404
• Mueller, LN, de Brouwer, JF, Almeida, JS, Stal, LJ, Xavier, JB (2006) Analysis of a marine phototrophic biofilm by confocal laser scanning microscopy using the new image quantification software PHLIP. BMC Ecol. 6 1 PMID:16412253
• Pedersen, K (1982) Method for studying microbial biofilms in flowing-water systems. Appl. Environ. Microbiol. 43 6-13 PMID:16345929
• Sanchez-Torres, V, Hu, H, Wood, TK (2011) GGDEF proteins YeaI, YedQ, and YfiN reduce early biofilm formation and swimming motility in Escherichia coli. Appl. Microbiol. Biotechnol. 90 651-8 PMID:21181144
• Ueda, A, Wood, TK (2009) Connecting quorum sensing, c-di-GMP, pel polysaccharide, and biofilm formation in Pseudomonas aeruginosa through tyrosine phosphatase TpbA (PA3885). PLoS Pathog. 5 e1000483 PMID:19543378