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| Phenotype of | Taxon Information | Genotype Information (if known) | Condition Information | OMP ID | OMP Term Name | ECO ID | ECO Term Name | Notes | Status | |
|---|---|---|---|---|---|---|---|---|---|---|
|
public |
a single strain under different conditions |
|
|
|
OMP:0000001 |
decreased antibiotic resistance |
ECO:0000001 |
plating dilutions |
Example 4 |
complete |
|
public |
a mutation or genetic difference within a strain |
|
|
|
OMP: 0000002 |
lethality |
ECO:000000 |
inability to construct this strain |
Example 3- we need to capture the "synthetic lethal" |
complete |
|
public |
a mutation or genetic difference within a strain |
|
|
|
OMP:000000 |
partial suppression of phenotype |
ECO:000000 |
high copy suppressor screen |
Example 2- need a place for "temperature-sensitive" and another box will drop so user can fill in the phenotype description in OMP terms. |
complete |
|
public |
a distinct species or taxonomic entity |
|
|
|
OMP: 0000004 |
bacillus cell shape |
ECO:0000004 |
microscopy |
complete | |
|
public |
a single strain under different conditions |
|
|
|
OMP: 000000 |
shortening of cell length |
ECO:0000004 |
microscopy |
trying to get at the rod to round transition E.coli makes when going from exponential to stationary phase. |
complete |
|
public |
a mutation or genetic difference within a strain |
|
|
|
OMP: 000000 |
filamentation |
ECO:0000004 |
microscopy |
Example 1- temperature-sensitive |
complete |
|
public |
a single strain under different conditions |
|
|
|
OMP: 000000 |
increased efflux activity |
ECO:000000 |
transport assay |
Example 6 (Phage # 81)- "Expression of mdtEF is up-regulated more than 20-fold by the anaerobic global regulator ArcA, resulting in increased efflux activity and enhanced drug tolerance in anaerobically grown "'E.coli cells." |
complete |
|
public |
a single strain under different conditions |
|
|
|
OMP: 000000 |
fast stop DNA replication defect |
ECO:000000 |
thymidine incorporation |
Example 5 (Phage # 29)- "In the absence of DskA, replication is rapidly arrested upon amino acid starvation." |
complete |
| Cancel |
