Difference between revisions of "OMP ST:8493 ! Escherichia coli K-12 EM1 pNTR-SD-Ptac::mraY"
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information | ||
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− | *Pangenome: | + | *Pangenome: Escherichia coli |
+ | *Subspecies and/or strain: K-12 | ||
+ | *NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333] | ||
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Genotype | !align=left align='left' bgcolor='#CCCCFF' |Genotype | ||
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F- Lambda- rph-1 | F- Lambda- rph-1 | ||
− | elyC740(del)::FRT-kan-FRT | + | elyC740(del)::FRT-kan-FRT pNTR-SD-Ptac::mraY |
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference | ||
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==Notes== | ==Notes== | ||
− | + | pNTR-SD-Ptac::mraY is NRBP 78 [https://shigen.nig.ac.jp/ecoli/strain/resource/mobilePlasmidClone/about NBRP Accession 78] | |
==Phenotype Annotation== | ==Phenotype Annotation== | ||
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | !|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | ||
+ | |- | ||
+ | | | ||
+ | OMP_AN:8295 | ||
+ | | | ||
+ | same phenotype as reference strain | ||
+ | | | ||
+ | OMP:0005342 | ||
+ | | | ||
+ | increased cell lysis | ||
+ | | | ||
+ | Relative to: OMP_AN:8279 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | +pNTR-SD-Ptac | ||
+ | <hr>Condition differences:<br> | ||
+ | no differences | ||
+ | | | ||
+ | *temperature:RT | ||
+ | *medium:CPRG (20 ug/mL) | ||
+ | *medium:IPTG (100 uM) | ||
+ | *medium:LB medium | ||
+ | *medium:NaCl (1%) | ||
+ | | | ||
+ | ECO:0000182 | ||
+ | | | ||
+ | in vitro culture assay evidence | ||
+ | | | ||
+ | PMID:24391520 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | |||
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Latest revision as of 13:02, 23 June 2017
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 EM1 pNTR-SD-Ptac::mraY |
---|---|
Synonyms | |
Taxon Information |
|
Genotype |
F- Lambda- rph-1 elyC740(del)::FRT-kan-FRT pNTR-SD-Ptac::mraY |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
pNTR-SD-Ptac::mraY is NRBP 78 NBRP Accession 78
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:8295 |
same phenotype as reference strain |
OMP:0005342 |
increased cell lysis |
Relative to: OMP_AN:8279 Genotype differences: +pNTR-SD-Ptac Condition differences: no differences |
|
ECO:0000182 |
in vitro culture assay evidence |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 Paradis-Bleau, C et al. (2014) A genome-wide screen for bacterial envelope biogenesis mutants identifies a novel factor involved in cell wall precursor metabolism. PLoS Genet. 10 e1004056 PubMed OMPwiki page