Difference between revisions of "OMP ST:773 ! Escherichia coli K-12 AW518"

Latest revision as of 01:15, 13 September 2018

Strain Summary

Strain Name	AW518
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsr-1 tsx-78 xylA5
Strain Reference	PMID:4884810^[1]
Strain availability
Ancestry	parent:OMP ST:772 ! Escherichia coli K-12 AW405
Annotated phenotypes
edit table

Notes

AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.^[2]

The tsr mutation in AW518 was named tsr-1 in Hedblom and Adler^[3].

Phenotype Annotation

Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:47	OMP:0000005	presence of cell motility	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:semi-solid tryptone agar	ECO:0000181	in vitro assay evidence	PMID:4916925^[4]
OMP_AN:48	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:45 Genotype differences: +tsr-1 Condition differences: no differences	temperature:35C medium:semi-solid tryptone agar	ECO:0000181	in vitro assay evidence	PMID:4916925^[4]
OMP_AN:49	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:46 Genotype differences: +tsr-1 Condition differences: medium:buffer + serine (CHEBIbuffer;serine (CHEBI	medium:buffer + serine (CHEBI:17115)	ECO:0000181	in vitro assay evidence	PMID:4916925^[4]
OMP_AN:341	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:403 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:acetate medium:chemotaxis medium	ECO:0007187	tumble frequency assay evidence used in manual assertion	PMID:333433^[5]	CHEBI:30089 acetate
OMP_AN:342	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:404 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:benzoate medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:16150 benzoate
OMP_AN:343	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:405 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:indole	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:35581 indole
OMP_AN:344	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:406 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:leucine	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:15603 leucine
OMP_AN:345	OMP:0007053	increased positive chemotaxis	Relative to: OMP_AN:105 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:aspartate medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:17053 aspartate
OMP_AN:346	OMP:0007053	increased positive chemotaxis	Relative to: OMP_AN:102 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:maltose	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:17306 maltose
OMP_AN:347	OMP:0007053	increased positive chemotaxis	Relative to: OMP_AN:401 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:galactose	ECO:0005609	capillary assay evidence	PMID:333433^[5]	CHEBI:28260 galactose
OMP_AN:348	OMP:0007053	increased positive chemotaxis	Relative to: OMP_AN:402 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:ribose	ECO:0005609	capillary assay evidence	PMID:333433^[5]	CHEBI:33942 ribose
OMP_AN:349	OMP:0007054	increased negative chemotaxis	Relative to: OMP_AN:407 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:Ni(II) medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]
OMP_AN:350	OMP:0007054	increased negative chemotaxis	Relative to: OMP_AN:408 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:Co(II) medium:chemotaxis medium	ECO:0005608	tumble frequency assay evidence	PMID:333433^[5]	CHEBI:48828 Co(II)
OMP_AN:422	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:421 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:serine	ECO:0007187	tumble frequency assay evidence used in manual assertion	PMID:333433^[5]	CHEBI:17115 serine
OMP_AN:494	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:492 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:alanine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CHEBI:16977 alanine	Threshold for response increased
OMP_AN:495	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:488 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:asparagine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CEHBI:17196 asparagine	Threshold for response increased
OMP_AN:496	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:489 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:cysteine	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CHEBI:17561 cysteine	Threshold for response increased
OMP_AN:497	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:491 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:glycine	ECO:0005609	capillary assay evidence	PMID:4562400^[6]		Threshold for response increased
OMP_AN:498	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:486 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:serine	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CHEBI:17715 serine	Threshold for response increased
OMP_AN:499	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:487 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:threonine	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CHEBI:16857 threonine	Threshold for response incresased
OMP_AN:500	OMP:0007053	increased positive chemotaxis	Relative to: OMP_AN:493 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:methionine	ECO:0005609	capillary assay evidence	PMID:4562400^[6]	CHEBI:16643 methionine
OMP_AN:562	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:543 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-serine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:17115 L-serine	Synthetic amino acid
OMP_AN:563	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:547 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:chemotaxis medium medium:glycine	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:15428 glycine	Synthetic amino acid
OMP_AN:564	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:550 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-threonine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:16857 L-threonine	Synthetic amino acid
OMP_AN:565	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:551 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-proline medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:17203 L-proline	Synthetic amino acid
OMP_AN:566	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:553 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-histidine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:15971 L-histidine	Synthetic amino acid
OMP_AN:567	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:554 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-isoleucine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:17191 L-isoleucine	Synthetic amino acid
OMP_AN:568	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:555 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-leucine medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:15603 L-leucine	Synthetic amino acid
OMP_AN:569	OMP:0007005	decreased negative chemotaxis	Relative to: OMP_AN:557 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:L-tryptophan medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:6350273^[7]	CHEBI:16828 L-tryptophan	Synthetic amino acid
OMP_AN:585	OMP:0000054	absence of positive chemotaxis	Relative to: OMP_AN:573 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:LiCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:48607 LiCl	Salt chemotaxis
OMP_AN:586	OMP:0000054	absence of positive chemotaxis	Relative to: OMP_AN:578 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:MgCl2 medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:6636 MgCl2	Salt chemotaxis
OMP_AN:587	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:572 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:NH4Cl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:31206 NH4Cl	Salt chemotaxis
OMP_AN:588	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:576 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:RbCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]		Salt chemotaxis
OMP_AN:589	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:577 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:CsCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]		Salt chemotaxis
OMP_AN:590	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:582 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:NaF medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:28741 NaF	Salt chemotaxis
OMP_AN:591	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:574 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:NaCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:26710 NaCl	Salt chemotaxis
OMP_AN:592	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:584 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:NaBr medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:63004 NaBr	Salt chemotaxis
OMP_AN:593	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:583 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:NaI medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:33167 NaI	Salt chemotaxis
OMP_AN:594	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:575 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:KCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:32588 KCl	Salt chemotaxis
OMP_AN:595	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:580 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:BaCl2 medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:63317 BaCl2	Salt chemotaxis
OMP_AN:596	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:581 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:CaCl2 medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]	CHEBI:3312 CaCl2	Salt chemotaxis
OMP_AN:589	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:577 Genotype differences: +tsr-1 Condition differences: no differences	temperature:30C medium:CsCl medium:chemotaxis medium	ECO:0005609	capillary assay evidence	PMID:2682648^[8]		Salt chemotaxis
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Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

↑ Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
↑ Hiatt, RA et al. (1978) Limitations of the intradermal test for schistosomiasis mansoni: experience from epidemiologic studies in a Puerto Rican community. Am. J. Trop. Med. Hyg. 27 535-41 PubMed OMPwiki page
↑ ^4.0 ^4.1 ^4.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
↑ ^5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
↑ ^6.0 ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 ^6.6 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
↑ ^7.0 ^7.1 ^7.2 ^7.3 ^7.4 ^7.5 ^7.6 ^7.7 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page
↑ ^8.00 ^8.01 ^8.02 ^8.03 ^8.04 ^8.05 ^8.06 ^8.07 ^8.08 ^8.09 ^8.10 ^8.11 ^8.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page

[PMID:4884810-1] Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page

[PMID:4861166-2] Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page

[PMID:677365-3] Hiatt, RA et al. (1978) Limitations of the intradermal test for schistosomiasis mansoni: experience from epidemiologic studies in a Puerto Rican community. Am. J. Trop. Med. Hyg. 27 535-41 PubMed OMPwiki page

[PMID:4916925-4] 4.0 ^4.1 ^4.2 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page

[PMID:333433-5] 5.00 ^5.01 ^5.02 ^5.03 ^5.04 ^5.05 ^5.06 ^5.07 ^5.08 ^5.09 ^5.10 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

[PMID:4562400-6] 6.0 ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 ^6.6 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page

[PMID:6350273-7] 7.0 ^7.1 ^7.2 ^7.3 ^7.4 ^7.5 ^7.6 ^7.7 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page

[PMID:2682648-8] 8.00 ^8.01 ^8.02 ^8.03 ^8.04 ^8.05 ^8.06 ^8.07 ^8.08 ^8.09 ^8.10 ^8.11 ^8.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page

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Difference between revisions of "OMP ST:773 ! Escherichia coli K-12 AW518"

Latest revision as of 01:15, 13 September 2018

Contents

Strain Summary

Notes

Phenotype Annotation

Additional Information

Links

References

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@@ Line 23: / Line 23: @@
 ||
 *Pangenome: Escherichia coli
-*Subspecies and/or strain: Taxon: K-12
+*Subspecies and/or strain: K-12
-*NCBI Taxonomy ID: NCBI Taxon ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
+*NCBI Taxonomy ID: [http://www.ncbi.nlm.nih.gov/taxonomy?term=83333 83333]
 |-
 !align=left align='left' bgcolor='#CCCCFF' |Genotype
@@ Line 40: / Line 40: @@
 !align=left align='left' bgcolor='#CCCCFF' |Ancestry
 ||
-parent:AW405
+parent:OMP ST:772 ! Escherichia coli K-12 AW405
 |-
 !align=left align='left' bgcolor='#CCCCFF' |Annotated phenotypes
@@ Line 47: / Line 47: @@
 |- class="tableEdit_footer"
-|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac&page=5935&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
+|<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac&page=6973&pagename={{FULLPAGENAMEE}}&type=1&template=Strain_info_table edit table]</div> ||
 |}
 <noinclude>
-<!-- OMP category tags -->[[Category:Strains that need OMP_ST accessions]]
+<!-- OMP category tags -->[[Category:OMP ST:772 ! Escherichia coli K-12 AW405 derivatives]]
 </noinclude>
 <!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.J556e2aea143ac--></protect>
@@ Line 57: / Line 57: @@
 AW405 is a derivative of AW330. The his-4 allele was introduced from strain AT1372[2] by transduction with P1, followed by penicillin selection.<ref name='PMID:4861166'/>
+The ''tsr'' mutation in AW518 was named ''tsr-1'' in Hedblom and Adler<ref name='PMID:677365'/>.
 ==Phenotype Annotation==
@@ Line 68: / Line 70: @@
 {| border="2" cellpadding="4" cellspacing="0" style="margin: 1em 1em 1em 0; border: 1px #aaa solid; border-collapse: collapse;"  id="Z556e2aea173f0"  class=" tableEdit OMP_annotation_table dataTable"
 |- align='left' bgcolor='#CCCCFF'
-!|Annotation ID!!not!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
+!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 |-
 |
@@ Line 176: / Line 178: @@
 *medium:chemotaxis medium
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-ECO:0005608
+ECO:0007187
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+tumble frequency assay evidence used in manual assertion
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 PMID:333433
@@ Line 208: / Line 210: @@
 ECO:0005608
 |
+tumble frequency assay evidence
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 PMID:333433
@@ Line 238: / Line 240: @@
 ECO:0005608
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+tumble frequency assay evidence
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 PMID:333433
@@ Line 268: / Line 270: @@
 ECO:0005608
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+tumble frequency assay evidence
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 ECO:0005608
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+tumble frequency assay evidence
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 ECO:0005608
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+tumble frequency assay evidence
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 ECO:0005609
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+capillary assay evidence
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 PMID:333433
@@ Line 388: / Line 390: @@
 ECO:0005609
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+capillary assay evidence
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 PMID:333433
@@ Line 418: / Line 420: @@
 ECO:0005608
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+tumble frequency assay evidence
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 ECO:0005608
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+tumble frequency assay evidence
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 *medium:serine
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-ECO:0005608
+ECO:0007187
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+tumble frequency assay evidence used in manual assertion
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 PMID:333433
@@ Line 508: / Line 510: @@
 ECO:0005609
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+capillary assay evidence
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 PMID:4562400
@@ Line 538: / Line 540: @@
 ECO:0005609
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+capillary assay evidence
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@@ Line 568: / Line 570: @@
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+capillary assay evidence
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@@ Line 598: / Line 600: @@
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+capillary assay evidence
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+capillary assay evidence
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@@ Line 658: / Line 660: @@
 ECO:0005609
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+capillary assay evidence
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@@ Line 686: / Line 688: @@
 *medium:methionine
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-ECO:0000181
+ECO:0005609
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-in vitro assay evidence
+capillary assay evidence
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 PMID:4562400
@@ Line 694: / Line 696: @@
 CHEBI:16643 methionine
 |
-Capillary assay
 |-
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@@ Line 716: / Line 718: @@
 *medium:chemotaxis medium
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-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
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 PMID:6350273
@@ Line 724: / Line 726: @@
 CHEBI:17115 L-serine
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-Capillary assay
 Synthetic amino acid
 |-
@@ Line 747: / Line 748: @@
 *medium:glycine
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-ECO:0000181
+ECO:0005609
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-in vitro assay evidence
+capillary assay evidence
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 PMID:6350273
@@ Line 755: / Line 756: @@
 CHEBI:15428 glycine
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-Capillary assay
 Synthetic amino acid
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@@ Line 778: / Line 778: @@
 *medium:chemotaxis medium
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-ECO:0000181
+ECO:0005609
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-in vitro assay evidence
+capillary assay evidence
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 PMID:6350273
@@ Line 786: / Line 786: @@
 CHEBI:16857 L-threonine
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-Capillary assay
 Synthetic amino acid
 |-
@@ Line 809: / Line 808: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:6350273
@@ Line 817: / Line 816: @@
 CHEBI:17203 L-proline
 |
-Capillary assay
 Synthetic amino acid
 |-
@@ Line 840: / Line 838: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:6350273
@@ Line 848: / Line 846: @@
 CHEBI:15971 L-histidine
 |
-Capillary assay
 Synthetic amino acid
 |-
@@ Line 871: / Line 868: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:6350273
@@ Line 879: / Line 876: @@
 CHEBI:17191 L-isoleucine
 |
-Capillary assay
 Synthetic amino acid
 |-
@@ Line 902: / Line 898: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:6350273
@@ Line 910: / Line 906: @@
 CHEBI:15603 L-leucine
 |
-Capillary assay
 Synthetic amino acid
 |-
@@ Line 933: / Line 928: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:6350273
@@ Line 941: / Line 936: @@
 CHEBI:16828 L-tryptophan
 |
-Capillary assay
 Synthetic amino acid
 |-
@@ Line 964: / Line 958: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 973: / Line 967: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 995: / Line 989: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,004: / Line 998: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,026: / Line 1,020: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,035: / Line 1,029: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,057: / Line 1,051: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,066: / Line 1,060: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,088: / Line 1,082: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,097: / Line 1,091: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,119: / Line 1,113: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,128: / Line 1,122: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,150: / Line 1,144: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,159: / Line 1,153: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,181: / Line 1,175: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,190: / Line 1,184: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,212: / Line 1,206: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,221: / Line 1,215: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,243: / Line 1,237: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,252: / Line 1,246: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,274: / Line 1,268: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,283: / Line 1,277: @@
 |
 Salt chemotaxis
-Capillary assay
 |-
 |
@@ Line 1,305: / Line 1,299: @@
 *medium:chemotaxis medium
 |
-ECO:0000181
+ECO:0005609
 |
-in vitro assay evidence
+capillary assay evidence
 |
 PMID:2682648
@@ Line 1,314: / Line 1,308: @@
 |
 Salt chemotaxis
-Capillary assay
+|-
+|
+OMP_AN:589
+|
+|
+OMP:0007041
+|
+decreased positive chemotaxis
+|
+Relative to: OMP_AN:577
+<hr>Genotype differences:<br>
++tsr-1
+<hr>Condition differences:<br>
+no differences
+|
+*temperature:30C
+*medium:CsCl
+*medium:chemotaxis medium
+|
+ECO:0005609
+|
+capillary assay evidence
+|
+PMID:2682648
+|
+|
+Salt chemotaxis
 |- class="tableEdit_footer"
 |<div class="tableEdit_editLink plainlinks">[{{SERVER}}{{SCRIPTPATH}}?title=Special:TableEdit&id=d41d8cd98f00b204e9800998ecf8427e.5935.Z556e2aea173f0&page=6973&pagename={{FULLPAGENAMEE}}&type=0&template=OMP_annotation_table edit table]</div> || || || || || || || || || ||
 |}
-<noinclude>
-<!-- OMP category tags -->
-</noinclude>
 <!--box uid=d41d8cd98f00b204e9800998ecf8427e.5935.Z556e2aea173f0--></protect>
@@ Line 1,334: / Line 1,356: @@
 {{RefHelp}}<references/>
-[[Category:Strain:Escherichia coli K-12 AW405]]
+[[Category:Derivatives of Escherichia coli K-12 AW405]]