Difference between revisions of "OMP ST:772 ! Escherichia coli K-12 AW405"

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(Table edited by JimHu via TableEdit)
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Revision as of 16:55, 8 June 2016

Strain Summary

Strain Name

AW405

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: Taxon: K-12
  • NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype

Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsx-78 xylA5

Strain Reference

PMID:4861166[1]

Strain availability

Coli Genetics Stock Center AW405

Ancestry

parent:AW330

Annotated phenotypes



Notes

Phenotype Annotation

Annotation ID not OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:44

OMP:0000005

presence of cell motility

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:35C
  • medium:semi-solid tryptone agar
ECO:0000181

in vitro assay evidence

PMID:4884810[2]

swim plate assay

OMP_AN:45

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:35C
  • medium:semi-solid tryptone agar
ECO:0000181

in vitro assay evidence

OMP_AN:46

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

ECO:0005609

PMID:4916925[3]

CHEBI:17115 serine

OMP_AN:102

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:maltose
ECO:0005608

PMID:333433[4]

CHEBI:17306 maltose

OMP_AN:105

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

CHEBI:17053 aspartate

OMP_AN:400

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:AiBu
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

OMP_AN:401

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:galactose
ECO:0005609

PMID:333433[4]

CHEBI:28260 galactose

OMP_AN:402

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:ribose
ECO:0005609

PMID:333433[4]

CHEBI:33942 ribose

OMP_AN:403

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:acetate
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

CHEBI:30089 acetate

OMP_AN:404

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:benzoate
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

CHEBI:16150 benzoate

OMP_AN:405

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:indole
ECO:0005608

PMID:333433[4]

CHEBI:35581 indole

OMP_AN:406

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:leucine
ECO:0005608

PMID:333433[4]

CHEBI:15603 leucine

OMP_AN:407

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:Ni(II)
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

OMP_AN:408

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:Co(II)
  • medium:chemotaxis medium
ECO:0005608

PMID:333433[4]

CHEBI:48828 Co(II)

OMP_AN:421

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:serine
ECO:0005608

PMID:333433[4]

CHEBI:17115 serine

OMP_AN:485

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
ECO:0005609

PMID:4562400[5]

CHEBI:17053 aspartate

OMP_AN:486

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:serine
ECO:0005609

PMID:4562400[5]

CHEBI:17115 serine

OMP_AN:487

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:threonine
ECO:0005609

PMID:4562400[5]

CHEBI:16857 threonine

OMP_AN:488

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:asparagine
  • medium:chemotaxis medium
ECO:0005609

PMID:4562400[5]

CHEBI:17196 asparagine

OMP_AN:489

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:cysteine
ECO:0005609

PMID:4562400[5]

CHEBI:17561 cysteine

OMP_AN:490

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:glutamate
ECO:0005609

PMID:4562400[5]

OMP_AN:491

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:glycine
ECO:0005609

PMID:4562400[5]

OMP_AN:492

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:alanine
  • medium:chemotaxis medium
ECO:0005609

PMID:4562400[5]

CHEBI:16977 alanine

OMP_AN:493

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:methionine
ECO:0005609

PMID:4562400[5]

CHEBI:16643 methionine

OMP_AN:504

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0 uM)
  • medium:serine
ECO:0005609

PMID:8444785[6]

CHEBI:17115 serine CHEBI:90630 omega-conotoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:505

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0 uM)
ECO:0005609

PMID:8444785[6]

CHEBI:17053 aspartate CHEBI:90630 omega-contoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:506

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:504


Genotype differences:

no differences


Condition differences:

medium:omega-conotoxin (0.5 uM)omega-conotoxin (0 uM)

  • temperature:30C
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0.5 uM)
  • medium:serine
ECO:0005609

PMID:8444785[6]

CHEBI:17115 serine CHEBI:90630 omega-conotoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:507

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:505


Genotype differences:

no differences


Condition differences:

medium:omega-conotoxin (0.5 uM)omega-conotoxin (0 uM)

  • temperature:30C
  • medium:aspartate
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0.5 uM)
ECO:0005609

PMID:8444785[6]

CHEBI:17053 aspartate CHEBI:90630 omega-contoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:508

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:Tris
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0.1 uM)
  • medium:serine
ECO:0005609

PMID:8444785[6]

CHEBI:17115 serine CHEBI: 90630 omega-conotoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:509

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:508


Genotype differences:

no differences


Condition differences:

medium:EDTA?

  • temperature:30C
  • medium:EDTA
  • medium:Tris
  • medium:chemotaxis medium
  • medium:omega-conotoxin (0.1 uM)
  • medium:serine
ECO:0005609

PMID:8444785[6]

CHEBI:17115 serine CHEBI:90630 omega-conotoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:516

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:D-aspartate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

CHEBI:17364 D-aspartate

OMP_AN:517

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:S-AMPA
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

CHEBI:34018 S-AMPA

OMP_AN:518

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-quisqualate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:519

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:ibotenate
ECO:0005609

PMID:8590457[7]

OMP_AN:520

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:N-methyl-L-aspartate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:521

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • medium:30C
  • medium:L-homocysteate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:522

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-cysteate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:526

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:N-methyl-D-aspartate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:527

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:PDA
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:528

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:N-methyl-L-glutamate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

CHEBI:21754 N-methyl-L-glutamate

OMP_AN:529

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:DL-AP4
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:530

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:cis-2,4-methanoglutamate
ECO:0005609

PMID:8590457[7]

OMP_AN:531

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:D-glutamate
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:532

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:kainate
ECO:0005609

PMID:8590457[7]

OMP_AN:533

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:DL-AP3
  • medium:chemotaxis medium
ECO:0005609

PMID:8590457[7]

OMP_AN:540

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:35C
  • medium:motility medium
  • medium:phenol (5 mM)
ECO:0005607

PMID:3025180[8]

CHEBI:15882 phenol

OMP_AN:542

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-aspartate
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17053 L-aspartate

Synthetic amino acid

OMP_AN:543

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-serine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17115 L-serine

Synthetic amino acid

OMP_AN:544

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-glutamate
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

Synthetic amino acid

OMP_AN:545

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-alanine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16977 L-alanine

Synthetic amino acid

OMP_AN:546

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-asparagine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17196 L-asparagine

Synthetic amino acid

OMP_AN:547

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:chemotaxis medium
  • medium:glycine
ECO:0005609

PMID:6350273[9]

CHEBI:15429 glycine

Synthetic amino acid

OMP_AN:548

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-cysteine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17561 L-cysteine

Synthetic amino acid

OMP_AN:549

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-methionine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16643 L-methionine

Synthetic amino acid

OMP_AN:550

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-threonine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16857 L-threonine

Synthetic amino acid

OMP_AN:551

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-proline
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17203 L-proline

Synthetic amino acid

OMP_AN:552

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-glutamine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:18050 L-glutamine

Synthetic amino acid

OMP_AN:553

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-histidine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:15971 L-histidine

Synthetic amino acid

OMP_AN:554

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-isoleucine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17191 L-isoleucine

Synthetic amino acid

OMP_AN:555

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-leucine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:15603 L-leucine

Synthetic amino acid

OMP_AN:556

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-phenylalanine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17295 L-phenylalanine

Synthetic amino acid

OMP_AN:557

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-tryptophan
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16828 L-tryptophan

Synthetic amino acid

OMP_AN:558

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-valine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16414 L-valine

Synthetic amino acid

OMP_AN:559

OMP:0000054

absence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-arginine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:16467 L-arginine

Synthetic amino acid

OMP_AN:560

OMP:0000054

absence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-lysine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:18019 L-lysine

Synthetic amino acid

OMP_AN:561

OMP:0000054

absence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-tyrosine
  • medium:chemotaxis medium
ECO:0005609

PMID:6350273[9]

CHEBI:17895 L-tyrosine

Synthetic amino acid

OMP_AN:572

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:NH4Cl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:31206 NH4Cl

Salt chemotaxis

OMP_AN:573

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:LiCl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:48607 LiCl

Salt chemotaxis

OMP_AN:574

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:NaCl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:26710 NaCl

Salt chemotaxis

OMP_AN:575

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:KCl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:32588 KCl

Salt chemotaxis

OMP_AN:576

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:RbCl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

Salt chemotaxis

OMP_AN:577

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:CsCl
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

Salt chemotaxis

OMP_AN:578

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:MgCl2
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:6636 MgCl2

Salt chemotaxis

OMP_AN:579

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:SrCl2
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:36383 SrCl2

Salt chemotaxis

OMP_AN:580

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:BaCl2
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:63317 BaCl2

Salt chemotaxis

OMP_AN:581

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:CaCl2
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:3312 CaCl2

Salt chemotaxis

OMP_AN:582

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:NaF
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:28741 NaF

Salt chemotaxis

OMP_AN:583

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:NaI
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:33167 NaI

Salt chemotaxis

OMP_AN:584

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:NaBr
  • medium:chemotaxis medium
ECO:0005609

PMID:2682648[10]

CHEBI:63004 NaBr

Salt chemotaxis

OMP_AN:623

OMP:0000052

presence of positive chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:30C
  • medium:L-serine (1 mM)
  • medium:Vogel-Bonner medium
  • medium:omega-conotoxin (0 uM)
ECO:0005609

PMID:10940028[11]

CHEBI:17115 L-serine CHEBI:90630 omega-conotoxin

Omega-conotoxin is a Calcium channel blocker

OMP_AN:624

OMP:0007041

decreased positive chemotaxis

Relative to: OMP_AN:623


Genotype differences:

no differences


Condition differences:

medium:>omega-conotoxin (0.2 uM)omega-conotoxin (0 uM)

  • temperature:30C
  • medium:>omega-conotoxin (0.2 uM)
  • medium:L-serine (1 mM)
  • medium:Vogel-Bonner medium
ECO:0005609

PMID:10940028[11]

CHEBI:17115 L-serine CHEBI:90630 omega-conotoxin

Omega-contoxin is a Calcium channel blocker

OMP_AN:630

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:25C
  • medium:glycerol (1M)
  • medium:motility medium
ECO:0005607

PMID:6339465[12]

CHEBI:17754 glycerol

OMP_AN:631

OMP:0000053

presence of negative chemotaxis

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:25C
  • medium:ethylene glycol (1M)
  • medium:motility medium
ECO:0005607

PMID:6339465[12]

CHEBI:30742 ethylene glycol




Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
  2. 2.0 2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
  3. 3.0 3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
  4. 4.00 4.01 4.02 4.03 4.04 4.05 4.06 4.07 4.08 4.09 4.10 4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
  5. 5.0 5.1 5.2 5.3 5.4 5.5 5.6 5.7 5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
  6. 6.0 6.1 6.2 6.3 6.4 6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page
  7. 7.00 7.01 7.02 7.03 7.04 7.05 7.06 7.07 7.08 7.09 7.10 7.11 7.12 7.13 7.14 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page
  8. Imae, Y et al. (1987) Phenol: a complex chemoeffector in bacterial chemotaxis. J. Bacteriol. 169 371-9 PubMed OMPwiki page
  9. 9.00 9.01 9.02 9.03 9.04 9.05 9.06 9.07 9.08 9.09 9.10 9.11 9.12 9.13 9.14 9.15 9.16 9.17 9.18 9.19 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page
  10. 10.00 10.01 10.02 10.03 10.04 10.05 10.06 10.07 10.08 10.09 10.10 10.11 10.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page
  11. 11.0 11.1 Tisa, LS et al. (2000) Effects of organic antagonists of Ca(2+), Na(+), and K(+) on chemotaxis and motility of escherichia coli. J. Bacteriol. 182 4856-61 PubMed OMPwiki page
  12. 12.0 12.1 Oosawa, K & Imae, Y (1983) Glycerol and ethylene glycol: members of a new class of repellents of Escherichia coli chemotaxis. J. Bacteriol. 154 104-12 PubMed OMPwiki page