Difference between revisions of "OMP ST:772 ! Escherichia coli K-12 AW405"

Revision as of 14:42, 15 February 2016

Strain Summary

Strain Name	AW405
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: Taxon: K-12 NCBI Taxonomy ID: NCBI Taxon ID: 83333
Genotype	Lambda- araC14 fhuA31 galK2(Oc) galT22 glnX44(AS) hisG4(Oc) lacY1 leuB6(Am) mgl-51 mtl-1 rfbC1 rpsL136(StrR) thiE1 thr-1 tsx-78 xylA5
Strain Reference	PMID:4861166^[1]
Strain availability	Coli Genetics Stock Center AW405
Ancestry	parent:AW330
Annotated phenotypes
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Notes

Phenotype Annotation

Annotation ID	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:44	OMP:0000005	presence of cell motility	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:semi-solid tryptone agar	ECO:0000181	in vitro assay evidence	PMID:4884810^[2]		swim plate assay
OMP_AN:45	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:semi-solid tryptone agar	ECO:0000181	in vitro assay evidence	PMID:4884810^[2] PMID:4916925^[3]
OMP_AN:46	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	medium:buffer medium:serine (CHEBI:17115)	ECO:0000181	in vitro assay evidence	PMID:4916925^[3]	CHEBI:17115 serine	capillary assay
OMP_AN:102	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:maltose	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:17306 maltose	Temporal assay
OMP_AN:105	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:17053 aspartate	Temporal assay
OMP_AN:400	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:AiBu medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]		Temporal assay
OMP_AN:401	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:galactose	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:28260 galactose	Capillary assay
OMP_AN:402	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:ribose	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:33942 ribose	Capillary assay
OMP_AN:403	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:acetate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:30089 acetate	Temporal assay
OMP_AN:404	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:benzoate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:16150 benzoate	Temporal assay
OMP_AN:405	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:indole	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:35581 indole	Temporal assay
OMP_AN:406	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:leucine	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:15603 leucine	Temporal assay
OMP_AN:407	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:Ni(II) medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]		Temporal assay
OMP_AN:408	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:Co(II) medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:48828 Co(II)	Temporal assay
OMP_AN:421	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:333433^[4]	CHEBI:17115 serine	Temporal assay
OMP_AN:485	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]		Capillary assay
OMP_AN:486	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:17115 serine	Capillary assay
OMP_AN:487	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:threonine	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:16857 threonine	Capillary assay
OMP_AN:488	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:asparagine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:17196 asparagine	Capillary assay
OMP_AN:489	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:cysteine	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:17561 cysteine	Capillary assay
OMP_AN:490	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:glutamate	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]		Capillary assay
OMP_AN:491	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:glycine	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]		Capillary assay
OMP_AN:492	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:alanine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:16977 alanine	Capillary assay
OMP_AN:493	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:methionine	ECO:0000181	in vitro assay evidence	PMID:4562400^[5]	CHEBI:16643 methionine	Capillary assay
OMP_AN:504	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:0 uM omega-conotoxin medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]	CHEBI:17115 serine	Capillary assay
OMP_AN:505	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:0 uM omega-conotoxin medium:aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]		Capillary assay
OMP_AN:506	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:504 Genotype differences: no differences Condition differences: medium:0.5 uM omega-conotoxin0 uM omega-conotoxin	temperature:30C medium:0.5 uM omega-conotoxin medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]	CHEBI:17115 serine	Capillary assay
OMP_AN:507	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:505 Genotype differences: no differences Condition differences: medium:0.5 uM omega-conotoxin0 uM omega-conotoxin	temperature:30C medium:0.5 uM omega-conotoxin medium:aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]		Capillary assay
OMP_AN:508	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:0.1 uM omega-conotoxin medium:Tris medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]	CHEBI:17115 serine	Capillary assay
OMP_AN:509	OMP:0007041	decreased positive chemotaxis	Relative to: OMP_AN:508 Genotype differences: no differences Condition differences: medium:EDTA?	temperature:30C medium:0.1 uM omega-conotoxin medium:EDTA medium:Tris medium:chemotaxis medium medium:serine	ECO:0000181	in vitro assay evidence	PMID:8444785^[6]	CHEBI:17115 serine	Capillary assay
OMP_AN:516	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:D-aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:517	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:S-AMPA medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]	CHEBI:34018 S-AMPA	Capillary assay
OMP_AN:518	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-quisqualate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:519	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:ibotenate	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:520	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:N-methyl-L-aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:521	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	medium:30C medium:L-homocysteate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:522	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:L-cysteate	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:526	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:N-methyl-D-aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:527	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:PDA medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:528	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:N-methyl-L-glutamate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]	CHEBI:21754 N-methyl-L-glutamate	Capillary assay
OMP_AN:529	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:DL-AP4 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:530	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:cis-2,4-methanoglutamate	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:531	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:D-glutamate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:532	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:kainate	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:533	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:DL-AP3 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:8590457^[7]		Capillary assay
OMP_AN:540	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:35C medium:motility medium medium:phenol (5 mM)	ECO:0000181	in vitro assay evidence	PMID:3025180^[8]	CHEBI:15882 phenol	Tethered cell assay
OMP_AN:542	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-aspartate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]		Capillary assay Synthetic amino acid
OMP_AN:543	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-serine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17115 L-serine	Capillary assay Synthetic amino acid
OMP_AN:544	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-glutamate medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]		Capillary assay Synthetic amino acid
OMP_AN:545	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-alanine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16977 L-alanine	Capillary assay Synthetic amino acid
OMP_AN:546	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-asparagine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17196 L-asparagine	Capillary assay Synthetic amino acid
OMP_AN:547	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:chemotaxis medium medium:glycine	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:15429 glycine	Capillary assay Synthetic amino acid
OMP_AN:548	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-cysteine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17561 L-cysteine	Capillary assay Synthetic amino acid
OMP_AN:549	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-methionine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16643 L-methionine	Capillary assay Synthetic amino acid
OMP_AN:550	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-threonine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16857 L-threonine	Capillary assay Synthetic amino acid
OMP_AN:551	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-proline medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17203 L-proline	Capillary assay Synthetic amino acid
OMP_AN:552	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-glutamine medium:chemotaxis medium	ECO:0000181		PMID:6350273^[9]	CHEBI:18050 L-glutamine	Capillary assay Synthetic amino acid
OMP_AN:553	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-histidine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:15971 L-histidine	Capillary assay Synthetic amino acid
OMP_AN:554	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-isoleucine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17191 L-isoleucine	Capillary assay Synthetic amino acid
OMP_AN:555	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-leucine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:15603 L-leucine	Capillary assay Synthetic amino acid
OMP_AN:556	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-phenylalanine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17295 L-phenylalanine	Capillary assay Synthetic amino acid
OMP_AN:557	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-tryptophan medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16828 L-tryptophan	Capillary assay Synthetic amino acid
OMP_AN:558	OMP:0000053	presence of negative chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-valine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16414 L-valine	Capillary assay Synthetic amino acid
OMP_AN:559	OMP:0000054	absence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-arginine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:16467 L-arginine	Capillary assay Synthetic amino acid
OMP_AN:560	OMP:0000054	absence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-lysine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:18019 L-lysine	Capillary assay Synthetic amino acid
OMP_AN:561	OMP:0000054	absence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:L-tyrosine medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:6350273^[9]	CHEBI:17895 L-tyrosine	Capillary assay Synthetic amino acid
OMP_AN:572	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:NH4Cl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:31206 NH4Cl	Salt chemotaxis Capillary assay
OMP_AN:573	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:LiCl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:48607 LiCl	Salt chemotaxis Capillary assay
OMP_AN:574	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:NaCl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:26710 NaCl	Salt chemotaxis Capillary assay
OMP_AN:575	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:KCl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:32588 KCl	Salt chemotaxis Capillary assay
OMP_AN:576	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:RbCl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]		Salt chemotaxis Capillary assay
OMP_AN:577	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:CsCl medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]		Salt chemotaxis Capillary assay
OMP_AN:578	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:MgCl2 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:6636 MgCl2	Salt chemotaxis Capillary assay
OMP_AN:579	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:SrCl2 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:36383 SrCl2	Salt chemotaxis Capillary assay
OMP_AN:580	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:BaCl2 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:63317 BaCl2	Salt chemotaxis Capillary assay
OMP_AN:581	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:CaCl2 medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:3312 CaCl2	Salt chemotaxis Capillary assay
OMP_AN:582	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:NaF medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:28741 NaF	Salt chemotaxis Capillary assay
OMP_AN:583	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:NaI medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:33167 NaI	Salt chemotaxis Capillary assay
OMP_AN:584	OMP:0000052	presence of positive chemotaxis	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:30C medium:NaBr medium:chemotaxis medium	ECO:0000181	in vitro assay evidence	PMID:2682648^[10]	CHEBI:63004 NaBr	Salt chemotaxis Capillary assay
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↑ Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page
↑ ^2.0 ^2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page
↑ ^3.0 ^3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page
↑ ^4.00 ^4.01 ^4.02 ^4.03 ^4.04 ^4.05 ^4.06 ^4.07 ^4.08 ^4.09 ^4.10 ^4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page
↑ ^5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 ^5.6 ^5.7 ^5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page
↑ ^6.0 ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page
↑ ^7.00 ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page
↑ Imae, Y et al. (1987) Phenol: a complex chemoeffector in bacterial chemotaxis. J. Bacteriol. 169 371-9 PubMed OMPwiki page
↑ ^9.00 ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 ^9.10 ^9.11 ^9.12 ^9.13 ^9.14 ^9.15 ^9.16 ^9.17 ^9.18 ^9.19 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page
↑ ^10.00 ^10.01 ^10.02 ^10.03 ^10.04 ^10.05 ^10.06 ^10.07 ^10.08 ^10.09 ^10.10 ^10.11 ^10.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page

[PMID:4861166-1] Armstrong, JB & Adler, J (1967) Genetics of motility in Escherichia coli: complementation of paralysed mutants. Genetics 56 363-73 PubMed OMPwiki page

[PMID:4884810-2] 2.0 ^2.1 Armstrong, JB & Adler, J (1969) Location of genes for motility and chemotaxis on the Escherichia coli genetic map. J. Bacteriol. 97 156-61 PubMed OMPwiki page

[PMID:4916925-3] 3.0 ^3.1 Hazelbauer, GL et al. (1969) Escherichia coli mutants defective in chemotaxis toward specific chemicals. Proc. Natl. Acad. Sci. U.S.A. 64 1300-7 PubMed OMPwiki page

[PMID:333433-4] 4.00 ^4.01 ^4.02 ^4.03 ^4.04 ^4.05 ^4.06 ^4.07 ^4.08 ^4.09 ^4.10 ^4.11 Springer, MS et al. (1977) Sensory transduction in Escherichia coli: two complementary pathways of information processing that involve methylated proteins. Proc. Natl. Acad. Sci. U.S.A. 74 3312-6 PubMed OMPwiki page

[PMID:4562400-5] 5.0 ^5.1 ^5.2 ^5.3 ^5.4 ^5.5 ^5.6 ^5.7 ^5.8 Mesibov, R & Adler, J (1972) Chemotaxis toward amino acids in Escherichia coli. J. Bacteriol. 112 315-26 PubMed OMPwiki page

[PMID:8444785-6] 6.0 ^6.1 ^6.2 ^6.3 ^6.4 ^6.5 Tisa, LS et al. (1993) Inhibition of Escherichia coli chemotaxis by omega-conotoxin, a calcium ion channel blocker. J. Bacteriol. 175 1235-8 PubMed OMPwiki page

[PMID:8590457-7] 7.00 ^7.01 ^7.02 ^7.03 ^7.04 ^7.05 ^7.06 ^7.07 ^7.08 ^7.09 ^7.10 ^7.11 ^7.12 ^7.13 ^7.14 Lake, EM et al. (1995) Analogue of aspartate and glutamate active at synapses are attractants for Escherichia coli. Cell. Mol. Neurobiol. 15 283-8 PubMed OMPwiki page

[PMID:3025180-8] Imae, Y et al. (1987) Phenol: a complex chemoeffector in bacterial chemotaxis. J. Bacteriol. 169 371-9 PubMed OMPwiki page

[PMID:6350273-9] 9.00 ^9.01 ^9.02 ^9.03 ^9.04 ^9.05 ^9.06 ^9.07 ^9.08 ^9.09 ^9.10 ^9.11 ^9.12 ^9.13 ^9.14 ^9.15 ^9.16 ^9.17 ^9.18 ^9.19 Hedblom, ML & Adler, J (1983) Chemotactic response of Escherichia coli to chemically synthesized amino acids. J. Bacteriol. 155 1463-6 PubMed OMPwiki page

[PMID:2682648-10] 10.00 ^10.01 ^10.02 ^10.03 ^10.04 ^10.05 ^10.06 ^10.07 ^10.08 ^10.09 ^10.10 ^10.11 ^10.12 Qi, YL & Adler, J (1989) Salt taxis in Escherichia coli bacteria and its lack in mutants. Proc. Natl. Acad. Sci. U.S.A. 86 8358-62 PubMed OMPwiki page

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Difference between revisions of "OMP ST:772 ! Escherichia coli K-12 AW405"

Revision as of 14:42, 15 February 2016

Contents

Strain Summary

Notes

Phenotype Annotation

Additional Information

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References

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@@ Line 2,291: / Line 2,291: @@
 |
 CHEBI:6636 MgCl2
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:579
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:SrCl2
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:36383 SrCl2
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:580
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:BaCl2
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:63317 BaCl2
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:581
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:CaCl2
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:3312 CaCl2
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:582
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:NaF
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:28741 NaF
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:583
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:NaI
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:33167 NaI
+|
+Salt chemotaxis
+Capillary assay
+|-
+|
+OMP_AN:584
+|
+|
+OMP:0000052
+|
+presence of positive chemotaxis
+|
+Relative to:
+<hr>Genotype differences:<br>
+Nothing to compare<br/>
+<hr>Condition differences:<br>
+Nothing to compare<br/>
+|
+*temperature:30C
+*medium:NaBr
+*medium:chemotaxis medium
+|
+ECO:0000181
+|
+in vitro assay evidence
+|
+PMID:2682648
+|
+CHEBI:63004 NaBr
 |
 Salt chemotaxis