Difference between revisions of "OMP ST:74795 ! Salmonella enterica serovar Enteritidis PT4 SEN1001(del)::FRT pNFB9"
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!align=left align='left' bgcolor='#CCCCFF' |Taxon Information | !align=left align='left' bgcolor='#CCCCFF' |Taxon Information | ||
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| − | + | *Pangenome: Salmonella enterica | |
| + | *Subspecies and/or strain: subsp enterica serovar Enteritidis | ||
| + | *NCBI Taxonomy ID: [https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&id=149539 149539] | ||
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Genotype | !align=left align='left' bgcolor='#CCCCFF' |Genotype | ||
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| − | SEN1001(del)::FRT | + | SEN1001(del)::FRT pNFB9 (vector plasmid) |
|- | |- | ||
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference | !align=left align='left' bgcolor='#CCCCFF' |Strain Reference | ||
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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | !|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes | ||
| + | |- | ||
| + | | | ||
| + | OMP_AN:37565 | ||
| + | | | ||
| + | same phenotype as reference strain | ||
| + | | | ||
| + | OMP:0005300 | ||
| + | | | ||
| + | decreased colonization of mouse tissue | ||
| + | | | ||
| + | Relative to: OMP_AN:37560 | ||
| + | |||
| + | <hr>Genotype differences:<br> | ||
| + | +pNFB9 | ||
| + | <hr>Condition differences:<br> | ||
| + | no differences | ||
| + | | | ||
| + | *other:1:1 ratio with parent strain P125109 | ||
| + | *other:BALB/c mouse | ||
| + | | | ||
| + | ECO:0001832 | ||
| + | | | ||
| + | host colonization assay evidence used in manual assertion | ||
| + | | | ||
| + | PMID:22083712 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | Assayed CFU in liver and spleen 2 days postinfection (Figure 3) | ||
| + | |- | ||
| + | | | ||
| + | OMP_AN:37569 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | OMP:0007943 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | Relative to: OMP_AN:37567 | ||
| + | |||
| + | <hr>Genotype differences:<br> | ||
| + | +SEN1001(del) +pNFB9 +(vector +plasmid) - | ||
| + | <hr>Condition differences:<br> | ||
| + | other:RAW264.7 murine macrophagesBALB/c mouse | ||
| + | | | ||
| + | other:RAW264.7 murine macrophages | ||
| + | | | ||
| + | ECO:0001832 | ||
| + | | | ||
| + | host colonization assay evidence used in manual assertion | ||
| + | | | ||
| + | PMID:22083712 | ||
| + | | | ||
| + | |||
| + | | | ||
| + | Intracellular survival determined after 20 hours in macrophages | ||
|- class="tableEdit_footer" | |- class="tableEdit_footer" | ||
Latest revision as of 17:00, 29 December 2020
Contents
Strain Summary
| Strain Name |
Salmonella enterica serovar Enteritidis PT4 SEN1001(del)::FRT pNFB9 |
|---|---|
| Synonyms | |
| Taxon Information |
|
| Genotype |
SEN1001(del)::FRT pNFB9 (vector plasmid) |
| Strain Reference | |
| Strain availability | |
| Ancestry |
parent:OMP ST:74790 ! Salmonella enterica serovar Enteritidis PT4 SEN1001(del)::FRT |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:37565 |
same phenotype as reference strain |
OMP:0005300 |
decreased colonization of mouse tissue |
Relative to: OMP_AN:37560 Genotype differences: +pNFB9 Condition differences: no differences |
|
ECO:0001832 |
host colonization assay evidence used in manual assertion |
Assayed CFU in liver and spleen 2 days postinfection (Figure 3) | ||
|
OMP_AN:37569 |
OMP:0007943 |
Relative to: OMP_AN:37567 Genotype differences: +SEN1001(del) +pNFB9 +(vector +plasmid) - Condition differences: other:RAW264.7 murine macrophagesBALB/c mouse |
other:RAW264.7 murine macrophages |
ECO:0001832 |
host colonization assay evidence used in manual assertion |
Intracellular survival determined after 20 hours in macrophages | ||||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ 1.0 1.1 1.2 Silva, CA et al. (2012) Infection of mice by Salmonella enterica serovar Enteritidis involves additional genes that are absent in the genome of serovar Typhimurium. Infect Immun 80 839-49 PubMed OMPwiki page
