Difference between revisions of "OMP ST:74667 ! Virtual reference strain for Nichols RJ (2011) Cell 144, 143-156."

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!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
 
!|Annotation ID!!Qualifier!!OMP ID!!OMP term name!!Relative phenotype information!!Experimental condition!!ECO ID!!ECO term name!!Reference!!Annotation Extension!!Notes
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OMP_AN:27248
 
|
 
 
|
 
OMP:0007247
 
|
 
resistant to a chemical
 
|
 
Relative to:
 
 
<hr>Genotype differences:<br>
 
Nothing to compare<br/>
 
<hr>Condition differences:<br>
 
Nothing to compare<br/>
 
|
 
*temperature:37C
 
*medium:LB agar
 
*medium:SDS
 
|
 
ECO:0007005
 
|
 
high throughput direct assay evidence used in manual assertion
 
|
 
PMID:21185072
 
|
 
towards some (CHEBI:8984)
 
SDS
 
|
 
concentrations of SDS used were (0.5, 1, 2, 3, or 4%)
 
 
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Latest revision as of 14:55, 10 October 2019

Strain Summary

Strain Name

Virtual reference strain for Nichols RJ (2011) Cell 144, 143-156.

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)::rrnB-3 rph-1

Strain Reference

PMID:21185072[1]

Strain availability
Ancestry
Annotated phenotypes



Notes

OMP_ST:74667 was created to use as the reference (or control) strain for the high-throughput phenotype studies of Nichols RJ et al. (2011) Cell 144:143-156. In this study, fitness in the various growth conditions was determined based on the sizes of spot colonies. Colony sizes were normalized in two steps. First, colony sizes on each individual plate were normalized to correct for systematic differences. Second, the colony sizes for each strain were normalized based on the median colony size of that strain in all 324 conditions.

Of the 4,602 strains that were screened, 4,502 strains were derivatives of E. coli K-12 BW25113; the remaining 100 strains were derivative of E. coli K-12 MG1655. For this reason, we have used the genotype of BW25113 as the genotype for the virtual reference strain.

The collection of mutants that was screened included 4334 deletions of non-essential genes (the Keio Collection ([1]), 148 SPA-tagged derivatives of essential genes ([2] [3]), 9 point-mutant alleles of essential genes (as well as the corresponding control strains that carried the same antibioticR marker linked to the wild-type allele), 2 truncations of essential genes, and 100 deletions of small RNAs and small proteins ([2]). See the original paper for additional details about the strains used in the screen.

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:27500

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Trimethoprim
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:45924) Trimethoprim

0.1, 0.2, 0.3, 0.4 ug/ml

OMP_AN:27501

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Dibucaine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:247956) Dibucaine

0.4, 0.8, 1.2 mM

OMP_AN:27502

OMP:0007373

resistant to alkylating agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:methyl methanesulfonate (MMS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:25255) methyl methanesulfonate (MMS)

0.05%

OMP_AN:27503

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Nitrofurantoin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:71415) Nitrofurantoin

0.1, 0.5, 1, 1.5, 2 ug/ml

OMP_AN:27504

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Novobiocin sodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31924) Novobiocin sodium salt

4, 6, 8, 10, 12, 30 ug/ml

OMP_AN:27505

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Methotrexate hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:165528) Methotrexate hydrate

1, 25 ug/ml

OMP_AN:27506

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Doxorubicin hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31522) Doxorubicin hydrochloride

1, 10 ug/ml

OMP_AN:27507

OMP:0007909

resistant to a chelator

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:EDTA disodium salt dihydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:64758) EDTA disodium salt dihydrate

0.1, 0.5, 1 mM

OMP_AN:27508

OMP:0007909

resistant to a chelator

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:EGTA
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:30740) EGTA

0.1, 0.5, 1, 2 mM

OMP_AN:27509

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cisplatin-cis-Diamineplatinum(II) dichloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27899) Cisplatin-cis-Diamineplatinum(II) dichloride

20, 50, 100 ug/ml

OMP_AN:27510

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Mitomycin C
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27504) Mitomycin C

0.1 ug/ml

OMP_AN:27511

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:(-)-Epinephrine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28918) (-)-Epinephrine

50, 250, 1000 uM

OMP_AN:27512

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Hydroxyurea
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:44423) Hydroxyurea

1, 5, 10 mM

OMP_AN:27513

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Phenazine methosulfate (PMS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8055) Phenazine methosulfate (PMS)

0.02, 0.05, 0.1 mM

OMP_AN:27514

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Chlorpromazine hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3649) Chlorpromazine hydrochloride

3, 6, 12, 24 uM

OMP_AN:27515

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Fusidic acid sodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:126963539) Fusidic acid sodium salt

1, 5, 20, 50 ug/ml

OMP_AN:27516

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Thiolactomycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:445629) Thiolactomycin

1, 5, 50 uM

OMP_AN:27517

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Nigericin sodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16760591) Nigericin sodium salt

0.1, 1, 5 uM

OMP_AN:27518

OMP:0006039

resistant to macrolide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Azithromycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2955) Azithromycin

0.02, 0.1, 1 ug/ml

OMP_AN:27519

OMP:0006039

resistant to macrolide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Clarithromycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3732) Clarithromycin

0.1, 1, 5, 10 ug/ml

OMP_AN:27520

OMP:0006039

resistant to macrolide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Erythromycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42355) Erythromycin

0.1, 1, 5, 10 ug/ml

OMP_AN:27521

OMP:0006039

resistant to macrolide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Spiramycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6419898) Spiramycin

1, 5, 20 ug/ml

OMP_AN:27522

OMP:0006065

resistant to tetracycline

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Doxycycline hyclate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34730) Doxycycline hyclate

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27523

OMP:0006065

resistant to tetracycline

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Minocycline hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:50697) Minocycline hydrochloride

0.2, 0.5, 1 ug/ml

OMP_AN:27524

OMP:0006065

resistant to tetracycline

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Tetracycline hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:35006) Tetracycline hydrochloride

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27525

OMP:0006060

resistant to aminoglycoside

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Amikacin sulfate salt (disulfate)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2638) Amikacin sulfate salt (disulfate)

0.05, 0.1, 0.2 ug/ml

OMP_AN:27526

OMP:0006060

resistant to aminoglycoside

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Gentamicin sulfate salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:5312) Gentamicin sulfate salt

0.05, 0.1 ug/ml

OMP_AN:27527

OMP:0006060

resistant to aminoglycoside

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Spectinomycin dihydrochloride pentahydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9217) Spectinomycin dihydrochloride pentahydrate

4, 6 ug/ml

OMP_AN:27528

OMP:0006060

resistant to aminoglycoside

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Streptomycin sulfate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32158) Streptomycin sulfate

0.05 ug/ml

OMP_AN:27529

OMP:0006060

resistant to aminoglycoside

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Tobramycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28864) Tobramycin

0.05, 0.1, 0.2, 0.4 ug/ml

OMP_AN:27530

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Amoxicillin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:2676) Amoxicillin

0.25, 0.5, 1, 1.5 ug/ml

OMP_AN:27531

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Ampicillin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28971) Ampicillin

1, 2, 4, 8 ug/ml

OMP_AN:27532

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Aztreonam
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:161680) Aztreonam

0.02, 0.04 ug/ml

OMP_AN:27533

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Carbenicillin disodium
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34609) Carbenicillin disodium

0.5, 1, 1.5 ug/ml

OMP_AN:27534

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cefoxitin sodium hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3501) Cefoxitin sodium hydrate

0.25, 0.5, 0.75, 1 ug/ml

OMP_AN:27535

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cefsulodin sodium salt hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31380) Cefsulodin sodium salt hydrate

6, 12, 18, 24 ug/ml

OMP_AN:27536

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Ceftazidime hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3509) Ceftazidime hydrate

0.025, 0.05, 0.075 ug/ml

OMP_AN:27537

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Mecillinam
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:51208) Mecillinam

0.03, 0.06, 0.09, 0.12 ug/ml

OMP_AN:27538

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Oxacillin sodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:52134) Oxacillin sodium salt

0.5, 5, 40 ug/ml

OMP_AN:27539

OMP:0006043

resistant to quinolone

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Ciprofloxacin hydrochloride hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:59936) Ciprofloxacin hydrochloride hydrate

0.004, 0.006, 0.008 ug/ml

OMP_AN:27540

OMP:0006043

resistant to quinolone

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Levofloxacin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:63598) Levofloxacin

0.002 ug/ml

OMP_AN:27541

OMP:0006043

resistant to quinolone

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Nalidixic acid sodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:3864541) Nalidixic acid sodium salt

0.5, 1, 1.5, 2 ug/ml

OMP_AN:27542

OMP:0006043

resistant to quinolone

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Norfloxacin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:100246) Norfloxacin

0.01, 0.02, 0.04 ug/ml

OMP_AN:27543

OMP:0006043

resistant to quinolone

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Streptonigrin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9287) Streptonigrin

0.1, 0.2, 0.5 ug/ml

OMP_AN:27544

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Chloramphenicol
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17698) Chloramphenicol

0.5, 1, 1.5, 2 ug/ml

OMP_AN:27545

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Isoniazid
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:6030) Isoniazid

0.2, 1, 1.5 mM

OMP_AN:27546

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Pyocyanin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8653) Pyocyanin

0.2, 1, 10 ug/ml

OMP_AN:27547

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Hydrogen peroxide
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:16240) Hydrogen peroxide

0.1, 0.5, 1, 2 mM

OMP_AN:27548

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cerulenin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:171741) Cerulenin

1, 2, 4, 6 ug/ml

OMP_AN:27549

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:CHIR-090
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:134107 CID:11546620) CHIR-090

0.02, 0.025, 0.04, 0.05, 0.075 ug/ml

OMP_AN:27550

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Ethidium Bromide
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:4883) Ethidium Bromide

2, 10, 50 ug/ml

OMP_AN:27551

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Rifampicin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28077) Rifampicin

1, 2 ug/ml

OMP_AN:27552

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Azidothymidine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:10110) Azidothymidine

0.5, 1, 2.5 ng/ml

OMP_AN:27553

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Puromycin dihydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8642) Puromycin dihydrochloride

1, 5, 25 ug/ml

OMP_AN:27554

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Tunicamycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:29699) Tunicamycin

1, 3, 7.5 ug/ml

OMP_AN:27555

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Fosfomycin disodium salt
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6093162) Fosfomycin disodium salt

1 ug/ml

OMP_AN:27556

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Bicyclomycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:60584) Bicyclomycin

1, 10 ug/ml

OMP_AN:27557

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:A22
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:2830968) A22

0.5, 2, 5, 15 ug/ml

OMP_AN:27558

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:D-Cycloserine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:40009) D-Cycloserine

16 ug/ml

OMP_AN:27559

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Actinomycin D
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:27666 CID:457193) Actinomycin D

2.5, 5, 10, 15 ug/ml

OMP_AN:27560

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Bacitracin Zinc Sulfate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16219032) Bacitracin Zinc Sulfate

100, 200, 300 ug/ml

OMP_AN:27561

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Bleomycin sulfate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:34582) Bleomycin sulfate

0.1, 0.5, 1, 2 ug/ml

OMP_AN:27562

OMP:0007171

resistant to antimicrobial peptide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cecropin B
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:16130488) Cecropin B

0.1, 0.3 ug/ml

OMP_AN:27563

OMP:0007171

resistant to antimicrobial peptide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Indolicidin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (UniProtKB:P33046) Indolicidin

0.1 ug/ml

OMP_AN:27564

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Phleomycin
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75044) Phleomycin

0.2, 0.5, 1 ug/ml

OMP_AN:27565

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Polymyxin B sulfate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8310) Polymyxin B sulfate

1, 2, 4, 6 ug/ml

OMP_AN:27566

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Vancomycin HCl hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9932) Vancomycin HCl hydrate

10, 20, 50 ug/ml

OMP_AN:27567

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Theophylline anhydrous
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28177) Theophylline anhydrous

10, 100 ug/ml

OMP_AN:27568

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:(±)-Verapamil hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53188) (±)-Verapamil hydrochloride

0.1, 0.5, 1 mM

OMP_AN:27569

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:EtOH
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:16236) EtOH

2, 4, 6 %

OMP_AN:27570

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Propidium iodide
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:51240) Propidium iodide

1, 20, 50 ug/ml

OMP_AN:27571

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3259) CCCP (Carbonyl cyanide 3-chlorophenylhydrazone)

0.1, 0.5, 2 ug/ml

OMP_AN:27572

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Epigallocatechin gallate (EGCG)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:4806) Epigallocatechin gallate (EGCG)

5, 20, 50 uM

OMP_AN:27573

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Procaine hydrochloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8431) Procaine hydrochloride

1, 5, 10, 30 mM

OMP_AN:27574

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Paraquat dichloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:28786) Paraquat dichloride

0.2, 1, 5, 10, 18 uM

OMP_AN:27575

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Acriflavine (acriflavinium chloride)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:74728) Acriflavine (acriflavinium chloride)

2, 10 ug/ml

OMP_AN:27576

OMP:0007829

resistant to sulfonamide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Sulfamethizole
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9331) Sulfamethizole

100, 200, 300 ug/ml

OMP_AN:27577

OMP:0007829

resistant to sulfonamide

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Sulfamonomethoxine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32164) Sulfamonomethoxine

50, 100 ug/ml

OMP_AN:27578

OMP:0007884

resistant to a metal

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cobalt stress-Co(II)Cl2 hexahydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53503) Cobalt stress-Co(II)Cl2 hexahydrate

0.1, 0.5 mM (LB)

OMP_AN:27579

OMP:0007884

resistant to a metal

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Copper stress-CuCl2 dihydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate

1, 2, 4 mM (LB)

OMP_AN:27580

OMP:0007884

resistant to a metal

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Nickel stress-Ni(II)Cl2 hexahydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate

0.1, 1 mM (LB)

OMP_AN:27581

OMP:0007892

resistant to a surfactant

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Benzalkonium chloride
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3020) Benzalkonium chloride

1, 10, 25 ug/ml

OMP_AN:27582

OMP:0007892

resistant to a surfactant

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:SDS
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:8984) SDS

0.5, 1, 2, 3, 4 %

OMP_AN:27583

OMP:0007892

resistant to a surfactant

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Triton X-100
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9750) Triton X-100

0.01, 0.03, 0.2 %

OMP_AN:27584

OMP:0007899

resistant to bile acids

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Taurocholic acid sodium salt hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23687511) Taurocholic acid sodium salt hydrate

0.1, 0.5, 1 %

OMP_AN:27585

OMP:0007899

resistant to bile acids

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cholate sodium hydrate
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23679061) Cholate sodium hydrate

0.1, 0.5, 1, 2 %

OMP_AN:27586

OMP:0007899

resistant to bile acids

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Deoxycholate sodium
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:9177) Deoxycholate sodium

0.1, 0.5, 2 %

OMP_AN:27587

OMP:0007899

resistant to bile acids

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:26711 + CHEBI:9177) Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177)

0.1, 0.5, 1, 2 %

OMP_AN:27588

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Triclosan/Irgasan
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:164200) Triclosan/Irgasan

0.05 ug/ml

OMP_AN:27589

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cefsulodin + Mecillinam
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31380 + CHEBI:51208) Cefsulodin + Mecillinam

6 + 0.03 ug/ml

OMP_AN:27590

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:6093162 + CHEBI:4170) Fosfomycin (CID:6093162) +Glucose-6-phosphate (CHEBI:4170)

0.05, 0.2 ug/ml (in 50 mg/ml G6P)

OMP_AN:27591

OMP:0007876

resistant to an antimicrobial agent

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:45924 + CHEBI:9331) Trimethoprim (CHEBI:45924) + Sulfamethizole (CHEBI:9331)

0.1 + 50 ug/ml

OMP_AN:27592

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Calcofluor White M2R (F3543 Fluorescent Brightener 28)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:50010) Calcofluor White M2R (F3543 Fluorescent Brightener 28)

50 ug/ml

OMP_AN:27593

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:(-)-Norepinephrine
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:18357) (-)-Norepinephrine

100, 1000 uM

OMP_AN:27594

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758)

0.5%/0.1mM, 0.5%/0.5mM, 1%/0.5mM

OMP_AN:27595

OMP:0007517

presence of population growth in high osmolarity

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:NaCl
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:26710) NaCl

150, 300, 450, 600 mM

OMP_AN:27596

OMP:0006047

resistant to beta-lactam

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Cefaclor
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:3478) Cefaclor

1, 2, 3 ug/ml

OMP_AN:27597

OMP:0007247

resistant to a chemical

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Radicicol
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:556075) Radicicol

1, 5, 10 uM

OMP_AN:27598

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:Iron excess-FeSO4 heptahydride (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)

1mM (MOPS; normal 100uM)

OMP_AN:27599

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:Iron starvation-FeSO4·7H2O (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)

2uM (MOPS; normal 100uM)

OMP_AN:27600

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:NH4Cl (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31206) NH4Cl (MOPS)

9.5mm

OMP_AN:27601

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Sodium Acetate anhydrous (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)

0.6%

OMP_AN:27602

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-(+) Glucosamine hydrochloride (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)

0.2%

OMP_AN:27603

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-Glucose anhydrous (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42758) D-Glucose anhydrous (M9)

0.2%

OMP_AN:27604

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Glycerol (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17754) Glycerol (M9)

0.4%

OMP_AN:27605

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-(+) Maltose monohydrate (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23615261) D-(+) Maltose monohydrate (M9)

0.1%

OMP_AN:27606

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:N-Acetyl-D-glucosamine (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)

0.15%

OMP_AN:27607

OMP:0007018

does not require growth factor(s)

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Succinic acid (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:15741) Succinic acid (M9)

0.3%

OMP_AN:27608

OMP:0007884

resistant to a metal

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:Iron excess-FeSO4 heptahydride (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride (MOPS)

1mM (MOPS; normal 100uM)

OMP_AN:27609

OMP:0007962

presence of cell population growth during nutrient limitation

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:Iron starvation-FeSO4·7H2O (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O (MOPS)

2uM (MOPS; normal 100uM)

OMP_AN:27610

OMP:0007306

presence of inorganic nitrogen source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:MOPS
  • medium:NH4Cl (MOPS)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:31206) NH4Cl (MOPS)

9.5mm

OMP_AN:27611

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Sodium Acetate anhydrous (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:32954) Sodium Acetate anhydrous (M9)

0.6%

OMP_AN:27612

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-(+) Glucosamine hydrochloride (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:91431) D-(+) Glucosamine hydrochloride (M9)

0.2%

OMP_AN:27613

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-Glucose anhydrous (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:42758) D-Glucose anhydrous (M9)

0.2%

OMP_AN:27614

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Glycerol (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:17754) Glycerol (M9)

0.4%

OMP_AN:27615

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:D-(+) Maltose monohydrate (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CID:23615261) D-(+) Maltose monohydrate (M9)

0.1%

OMP_AN:27616

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:N-Acetyl-D-glucosamine (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:506227) N-Acetyl-D-glucosamine (M9)

0.15%

OMP_AN:27617

OMP:0006024

presence of organic carbon source utilization

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:M9
  • medium:Succinic acid (M9)
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:15741) Succinic acid (M9)

0.3%

OMP_AN:27618

OMP:0005190

presence of anaerobic growth

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Anaerobic
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

OMP_AN:27619

OMP:0007282

presence of UV radiation resistance

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:UV
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

6, 12, 18, 24 sec

OMP_AN:27620

OMP:0007956

presence of population growth at low temperature

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:Low temperature
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

16, 18, 20 C

OMP_AN:27621

OMP:0007950

presence of population growth at high temperature

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:High temperature
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

40, 42, 43.5, 45 C

OMP_AN:27622

OMP:0007945

presence of population growth at acidic pH

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:MES-HOMOPIPES
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES

pH 4, 4.5, 5, 6

OMP_AN:27623

OMP:0007771

presence of population growth at alkaline pH

Relative to:


Genotype differences:

Nothing to compare


Condition differences:

Nothing to compare

  • temperature:37C
  • medium:LB agar
  • medium:TAPS
ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (**SID:24900259) TAPS

pH 8, 9, 9.5, 10


Additional Information

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References

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