OMP ST:72919 ! Escherichia coli K-12 JW2598
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 JW2598 |
---|---|
Synonyms |
JW2598-1 |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 bamE773(del)::FRT-kan-FRT |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:32197 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27594 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:64758 + CHEBI:8984) SDS (CHEBI:8984) +EDTA (CHEBI:64758) |
| ||
OMP_AN:32198 |
OMP:0007954 |
decreased population growth at high temperature |
Relative to: OMP_AN:27621 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences:
|
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
OMP_AN:32199 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:2830968) A22 |
| ||
OMP_AN:32200 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27531 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28971) Ampicillin |
| ||
OMP_AN:32201 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2955) Azithromycin |
| ||
OMP_AN:32202 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27549 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:134107 CID:11546620) CHIR-090 |
| ||
OMP_AN:32203 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27514 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3649) Chlorpromazine hydrochloride |
| ||
OMP_AN:32204 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27603 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:32205 |
OMP:0007071 |
increased organic carbon source utilization |
Relative to: OMP_AN:27613 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:32206 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27580 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate |
| ||
OMP_AN:32207 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27574 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28786) Paraquat dichloride |
| ||
OMP_AN:32208 |
OMP:0007896 |
decreased resistance to a surfactant |
Relative to: OMP_AN:27582 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8984) SDS |
| ||
OMP_AN:32209 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27567 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28177) Theophylline anhydrous |
| ||
OMP_AN:32210 |
OMP:0007008 |
decreased population growth at acidic pH |
Relative to: OMP_AN:27622 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (**SID:329817955 SID:57651422) MES-HOMOPIPES |
| ||
OMP_AN:32211 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27551 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28077) Rifampicin |
| ||
OMP_AN:32212 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27521 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:6419898) Spiramycin |
| ||
OMP_AN:32213 |
OMP:0006036 |
decreased resistance to macrolide |
Relative to: OMP_AN:27518 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2955) Azithromycin |
| ||
OMP_AN:32214 |
OMP:0007895 |
increased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
OMP_AN:32215 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27561 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:34582) Bleomycin sulfate |
| ||
OMP_AN:32216 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27535 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31380) Cefsulodin sodium salt hydrate |
| ||
OMP_AN:32217 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27501 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:247956) Dibucaine |
| ||
OMP_AN:32218 |
OMP:0006045 |
increased resistance to beta-lactam compound |
Relative to: OMP_AN:27537 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:51208) Mecillinam |
| ||
OMP_AN:32219 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27560 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:16219032) Bacitracin Zinc Sulfate |
| ||
OMP_AN:32220 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27569 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:16236) EtOH |
| ||
OMP_AN:32221 |
OMP:0006040 |
decreased resistance to quinolone |
Relative to: OMP_AN:27542 Genotype differences: +lacZ4787(del)( +bamE773(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:100246) Norfloxacin |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 2.14 2.15 2.16 2.17 2.18 2.19 2.20 2.21 2.22 2.23 2.24 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
o
- OMP:0006036 ! decreased resistance to macrolide
- OMP:0006040 ! decreased resistance to quinolone
- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0006045 ! increased resistance to beta-lactam compound
- OMP:0007008 ! decreased growth at acidic pH
- OMP:0007071 ! increased organic carbon source utilization
- OMP:0007074 ! increased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007895 ! increased resistance to a surfactant
- OMP:0007896 ! decreased resistance to a surfactant