OMP ST:72721 ! Escherichia coli K-12 JW2309
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 JW2309 |
---|---|
Synonyms |
JW2309-1 |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 purF723(del)::FRT-kan-FRT |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:31465 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27587 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:26711 + CHEBI:9177) Bile salts chemical-Mixture of sodium cholate (CHEBI:26711) and sodium deoxycholate (CHEBI:9177) |
| ||
OMP_AN:31466 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27602 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:31467 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27612 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:91431) D-(+) Glucosamine hydrochloride |
| ||
OMP_AN:31468 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27603 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:31469 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27613 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
OMP_AN:31470 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:31471 |
OMP:0007032 |
decreased utilization of inorganic nitrogen source |
Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31206) NH4Cl |
| ||
OMP_AN:31472 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27503 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:71415) Nitrofurantoin |
| ||
OMP_AN:31473 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27574 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:28786) Paraquat dichloride |
| ||
OMP_AN:31474 |
OMP:0007903 |
decreased resistance to bile acids |
Relative to: OMP_AN:27584 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:23687511) Taurocholic acid sodium salt hydrate |
| ||
OMP_AN:31475 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27598 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
OMP_AN:31476 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27608 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron excess-FeSO4 heptahydride |
| ||
OMP_AN:31477 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27599 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
OMP_AN:31478 |
OMP:0007937 |
decreased resistance to nutrient limitation |
Relative to: OMP_AN:27609 Genotype differences: +lacZ4787(del)( +purF723(del) -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:75836) Iron starvation-FeSO4·7H2O |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 2.11 2.12 2.13 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
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- OMP:0007032 ! decreased utilization of inorganic nitrogen source
- OMP:0007070 ! decreased organic carbon source utilization
- OMP:0007075 ! decreased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007903 ! decreased resistance to bile acids
- OMP:0007937 ! decreased resistance to nutrient limitation