Difference between revisions of "OMP ST:71354 ! Escherichia coli K-12 JW0233"
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| − | OMP: | + | OMP:0007074 |
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| − | + | increased growth factor requirement | |
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Relative to: OMP_AN:27599 | Relative to: OMP_AN:27599 | ||
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*temperature:37C | *temperature:37C | ||
*medium:MOPS | *medium:MOPS | ||
| − | *medium:Iron starvation | + | *medium:FeSO4 (1 uM, Iron starvation) |
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ECO:0007005 | ECO:0007005 | ||
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PMID:21185072 | PMID:21185072 | ||
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| − | * | + | *FeSO4 concentration= 2uM (MOPS; normal 100uM) |
*normalized fitness= -13.42 | *normalized fitness= -13.42 | ||
Latest revision as of 19:24, 7 June 2021
Contents
Strain Summary
| Strain Name |
Escherichia coli K-12 JW0233 |
|---|---|
| Synonyms |
JW0233-2 |
| Taxon Information |
|
| Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)::rrnB-3 rph-1 proA761(del)::FRT-kan-FRT |
| Strain Reference | |
| Strain availability | |
| Ancestry | |
| Annotated phenotypes |
|
Notes
Phenotype Annotation
| Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
|---|---|---|---|---|---|---|---|---|---|---|
|
OMP_AN:28211 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27601 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -9.5 | |||
|
OMP_AN:28213 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27606 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -15.59 | |||
|
OMP_AN:28215 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27602 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:28217 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27603 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:42758) D-Glucose anhydrous |
| ||
|
OMP_AN:28219 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27604 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -20.78 | |||
|
OMP_AN:28221 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27605 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -15.46 | |||
|
OMP_AN:28223 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27600 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -23.94 | |||
|
OMP_AN:28225 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27607 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
normalized fitness= -10.5 | |||
|
OMP_AN:28226 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27617 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:15741) Succinic acid |
| ||
|
OMP_AN:28227 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27598 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
|
OMP_AN:28229 |
OMP:0007074 |
increased growth factor requirement |
Relative to: OMP_AN:27599 Genotype differences: +proA761(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
| |||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
- ↑ Baba, T et al. (2006) Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol. Syst. Biol. 2 2006.0008 PubMed OMPwiki page
- ↑ 2.00 2.01 2.02 2.03 2.04 2.05 2.06 2.07 2.08 2.09 2.10 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
