Difference between revisions of "OMP ST:71097 ! Escherichia coli K-12 BW25113 ribB::SPA-kan"

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*chemical concentration= 1 mM (LB)
 
*chemical concentration= 1 mM (LB)
 
*normalized fitness= 3.6  
 
*normalized fitness= 3.6  
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OMP_AN:37533
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OMP:0007886
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decreased resistance to a metal
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Relative to: OMP_AN:27580
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<hr>Genotype differences:<br>
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+lacZ4787(del)( +ribB  -lacZ4787(del)
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<hr>Condition differences:<br>
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no differences
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*temperature:37C
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*medium:LB agar
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*medium:Nickel stress-Ni(II)Cl2 hexahydrate
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ECO:0007005
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high throughput direct assay evidence used in manual assertion
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PMID:21185072
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towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate
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*chemical concentration= 0.1 mM (LB)
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*normalized fitness= -3.48
  
 
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Revision as of 13:07, 23 October 2019

Strain Summary

Strain Name

Escherichia coli K-12 BW25113 ribB::SPA-kan

Synonyms
Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 ribB::SPA-kan

Strain Reference

PMID:21185072[1]

Strain availability
Ancestry

parent:OMP ST:800 ! Escherichia coli K-12 BW25113

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:37532

OMP:0007888

increased resistance to a metal

Relative to: OMP_AN:27579

Genotype differences:

+lacZ4787(del)( +ribB -lacZ4787(del)

Condition differences:

no differences

  • temperature:37C
  • medium:LB agar
  • medium:Copper stress-CuCl2 dihydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate

  • chemical concentration= 1 mM (LB)
  • normalized fitness= 3.6

OMP_AN:37533

OMP:0007886

decreased resistance to a metal

Relative to: OMP_AN:27580

Genotype differences:

+lacZ4787(del)( +ribB -lacZ4787(del)

Condition differences:

no differences

  • temperature:37C
  • medium:LB agar
  • medium:Nickel stress-Ni(II)Cl2 hexahydrate
 ECO:0007005

high throughput direct assay evidence used in manual assertion

PMID:21185072[1]

towards some (CHEBI:53542) Nickel stress-Ni(II)Cl2 hexahydrate

  • chemical concentration= 0.1 mM (LB)
  • normalized fitness= -3.48
edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 1.2 Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
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