Difference between revisions of "OMP ST:71068 ! Escherichia coli K-12 BW25113 pheT::SPA-kan"
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Relative to: OMP_AN:27607 | Relative to: OMP_AN:27607 | ||
+ | |||
+ | <hr>Genotype differences:<br> | ||
+ | +lacZ4787(del)( +pheT -lacZ4787(del) | ||
+ | <hr>Condition differences:<br> | ||
+ | no differences | ||
+ | | | ||
+ | |||
+ | *temperature:37C | ||
+ | *medium:M9 | ||
+ | *medium:Succinic acid | ||
+ | | | ||
+ | ECO:0007005 | ||
+ | | | ||
+ | high throughput direct assay evidence used in manual assertion | ||
+ | | | ||
+ | PMID:21185072 | ||
+ | | | ||
+ | towards some (CHEBI:15741) Succinic acid | ||
+ | | | ||
+ | |||
+ | *chemical concentration= 0.3% | ||
+ | *normalized fitness= -3.61 | ||
+ | |- | ||
+ | | | ||
+ | OMP_AN:37514 | ||
+ | | | ||
+ | |||
+ | | | ||
+ | OMP:0007070 | ||
+ | | | ||
+ | decreased organic carbon source utilization | ||
+ | | | ||
+ | Relative to: OMP_AN:27617 | ||
<hr>Genotype differences:<br> | <hr>Genotype differences:<br> |
Revision as of 13:06, 23 October 2019
Contents
Strain Summary
Strain Name |
Escherichia coli K-12 BW25113 pheT::SPA-kan |
---|---|
Synonyms | |
Taxon Information |
|
Genotype |
DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 pheT::SPA-kan |
Strain Reference | |
Strain availability | |
Ancestry | |
Annotated phenotypes |
|
Notes
Phenotype Annotation
Annotation ID | Qualifier | OMP ID | OMP term name | Relative phenotype information | Experimental condition | ECO ID | ECO term name | Reference | Annotation Extension | Notes |
---|---|---|---|---|---|---|---|---|---|---|
OMP_AN:37503 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27557 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CID:2830968) A22 |
| ||
OMP_AN:37504 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27601 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
OMP_AN:37505 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27611 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:32954) Sodium Acetate anhydrous |
| ||
OMP_AN:37506 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27530 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:2676) Amoxicillin |
| ||
OMP_AN:37507 |
OMP:0007878 |
increased resistance to an antimicrobial agent |
Relative to: OMP_AN:27552 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:10110) Azidothymidine |
| ||
OMP_AN:37508 |
OMP:0007896 |
decreased resistance to a surfactant |
Relative to: OMP_AN:27581 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:3020) Benzalkonium chloride |
| ||
OMP_AN:37509 |
OMP:0006044 |
decreased resistance to beta-lactam |
Relative to: OMP_AN:27535 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:31380) Cefsulodin sodium salt hydrate |
| ||
OMP_AN:37510 |
OMP:0007886 |
decreased resistance to a metal |
Relative to: OMP_AN:27579 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:86318) Copper stress-CuCl2 dihydrate |
| ||
OMP_AN:37511 |
OMP:0007249 |
decreased resistance to a chemical |
Relative to: OMP_AN:27573 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8431) Procaine hydrochloride |
| ||
OMP_AN:37512 |
OMP:0007879 |
decreased resistance to an antimicrobial agent |
Relative to: OMP_AN:27546 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:8653) Pyocyanin |
| ||
OMP_AN:37513 |
OMP:0007075 |
decreased growth factor requirement |
Relative to: OMP_AN:27607 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:15741) Succinic acid |
| ||
OMP_AN:37514 |
OMP:0007070 |
decreased organic carbon source utilization |
Relative to: OMP_AN:27617 Genotype differences: +lacZ4787(del)( +pheT -lacZ4787(del) Condition differences: no differences |
|
ECO:0007005 |
high throughput direct assay evidence used in manual assertion |
towards some (CHEBI:15741) Succinic acid |
| ||
Additional Information
Links
References
See Help:References for how to manage references in OMPwiki.
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- OMP:0006044 ! decreased resistance to beta-lactam
- OMP:0007070 ! decreased organic carbon source utilization
- OMP:0007075 ! decreased growth factor requirement
- OMP:0007249 ! decreased resistance to a chemical
- OMP:0007878 ! increased resistance to an antimicrobial agent
- OMP:0007879 ! decreased resistance to an antimicrobial agent
- OMP:0007886 ! decreased resistance to a metal
- OMP:0007896 ! decreased resistance to a surfactant