OMP ST:71028 ! Escherichia coli K-12 BW25113 bamA6-kan

From OMPwiki
Revision as of 18:18, 8 July 2020 by Siegele (talk | contribs) (Table edited by $2 via TableEdit)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)

Strain Summary

Strain Name

Escherichia coli K-12 BW25113 bamA6-kan

Synonyms

ECK0176-B-YAET(218-9 DUPL)-KAN-Allele (Nichols et al. 2011. Supplemental Table S2)

Taxon Information
  • Pangenome: Escherichia coli
  • Subspecies and/or strain: K-12
  • NCBI Taxonomy ID: 83333
Genotype

DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 bamA6-kan

Strain Reference

PMID:21185072[1]

Strain availability
Ancestry

parent:OMP ST:800 ! Escherichia coli K-12 BW25113

Annotated phenotypes



Notes

The bamA6 allele is a duplication of Q217 and K218 in a long loop in the third POTRA domain of BamA.[2],[3]

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. Nichols, RJ et al. (2011) Phenotypic landscape of a bacterial cell. Cell 144 143-56 PubMed OMPwiki page
  2. Ruiz, N et al. (2006) Probing the barrier function of the outer membrane with chemical conditionality. ACS Chem. Biol. 1 385-95 PubMed OMPwiki page
  3. Hagan, CL & Kahne, D (2011) The reconstituted Escherichia coli Bam complex catalyzes multiple rounds of β-barrel assembly. Biochemistry 50 7444-6 PubMed OMPwiki page