OMP ST:71003 ! Escherichia coli K-12 BW25113 lptD::DAS-kan

Strain Summary

Strain Name	Escherichia coli K-12 BW25113 lptD::DAS-kan
Synonyms	ECK0055-C-IMP-DAS-KAN (Nichols et al. 2011. Supplemental Table S2).
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: K-12 NCBI Taxonomy ID: 83333
Genotype	DE(araD-araB)567 DE(rhaD-rhaB)568 F- Lambda- hsdR514 lacZ4787(del)(::rrnB-3) rph-1 lptD::DAS-kan
Strain Reference	PMID:21185072
Strain availability
Ancestry	parent:OMP ST:800 ! Escherichia coli K-12 BW25113
Annotated phenotypes
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Phenotype Annotation

Annotation ID	Qualifier	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:37393		OMP:0007075	decreased growth factor requirement	Relative to: OMP_AN:27600 Genotype differences: +lacZ4787(del)( +lptD -lacZ4787(del) Condition differences: no differences	temperature:37C medium:MOPS medium:NH4Cl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:31206) NH4Cl	chemical concentration= 9.5mm normalized fitness= -3.8
OMP_AN:37394		OMP:0007032	decreased utilization of inorganic nitrogen source	Relative to: OMP_AN:27610 Genotype differences: +lacZ4787(del)( +lptD -lacZ4787(del) Condition differences: no differences	temperature:37C medium:MOPS medium:NH4Cl	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:31206) NH4Cl	chemical concentration= 9.5mm normalized fitness= -3.8
OMP_AN:37395		OMP:0007249	decreased resistance to a chemical	Relative to: OMP_AN:27574 Genotype differences: +lacZ4787(del)( +lptD -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Paraquat dichloride	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:28786) Paraquat dichloride	chemical concentration= 5 uM normalized fitness= -3.79
OMP_AN:37396		OMP:0006061	decreased resistance to tetracycline	Relative to: OMP_AN:27522 Genotype differences: +lacZ4787(del)( +lptD -lacZ4787(del) Condition differences: no differences	temperature:37C medium:LB agar medium:Doxycycline hyclate	ECO:0007005	high throughput direct assay evidence used in manual assertion	PMID:21185072	towards some (CHEBI:34730) Doxycycline hyclate	chemical concentration= 1 ug/ml normalized fitness= -3.46
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References

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