OMP ST:6329 ! Escherichia coli O157:H7 EDL933

Strain Summary

Strain Name	Escherichia coli O157:H7 EDL933
Synonyms
Taxon Information	Pangenome: Escherichia coli Subspecies and/or strain: O157:H7 NCBI Taxonomy ID: 83334
Genotype
Strain Reference
Strain availability	ATCC 43895
Ancestry
Annotated phenotypes
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Phenotype Annotation

Annotation ID	not	OMP ID	OMP term name	Relative phenotype information	Experimental condition	ECO ID	ECO term name	Reference	Annotation Extension	Notes
OMP_AN:7573		OMP:0000176	biofilm phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	other:96 well plate temperature:37C medium:LB medium	ECO:0000181	in vitro assay evidence	PMID:24837471		Biofilm formation assay
OMP_AN:7574		OMP:0007026	decreased biofilm formation	Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Coladonin (0.5 ug/mL)?	other:96 well plate temperature:37C medium:>= Coladonin (0.5 ug/mL) medium:LB medium	ECO:0000181	in vitro assay evidence	PMID:24837471		Biofilm formation assay
OMP_AN:7575		OMP:0007026	decreased biofilm formation	Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Coumarin (0.5 ug./mL)?	other:96 well plate temperature:37C medium:>= Coumarin (0.5 ug./mL) medium:LB medium	ECO:0000181	in vitro assay evidence	PMID:24837471	CHEBI:28794 Coumarin	Biofilm formation assay
OMP_AN:7576		OMP:0007026	decreased biofilm formation	Relative to: OMP_AN:7573 Genotype differences: no differences Condition differences: medium:>= Umbelliferone (0.5 ug/mL)?	other:96 well plate temperature:37C medium:>= Umbelliferone (0.5 ug/mL) medium:LB medium	ECO:0000181	in vitro assay evidence	PMID:24837471	CHEBI:27510 Umbelliferone	Biofilm formation assay
OMP_AN:7577		OMP:0000067	presence of cell motility by swarming	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:24837471
OMP_AN:7578		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:7577 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)?	temperature:37C medium:Coumarin (50 ug/mL) medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:24837471	CHEBI:28794 Coumarin
OMP_AN:7579		OMP:0007092	decreased cell motility by swarming	Relative to: OMP_AN:7577 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)?	temperature:37C medium:Umbelliferone (50 ug/mL) medium:swarming motility medium	ECO:0005803	motility assay evidence	PMID:24837471	CHEBI:27510 Umbelliferone
OMP_AN:7580		OMP:0000111	presence of cell motility by swimming	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:24837471
OMP_AN:7581	NOT	OMP:0005324	altered cell motility by swimming	Relative to: OMP_AN:7580 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)?	temperature:37C medium:Coumarin (50 ug/mL) medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:24837471	CHEBI:28794 Coumarin
OMP_AN:7582	NOT	OMP:0005324	altered cell motility by swimming	Relative to: OMP_AN:7580 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)?	temperature:37C medium:Umbelliferone (50 ug/mL) medium:swimming motility medium	ECO:0005803	motility assay evidence	PMID:24837471	CHEBI:27510 Umbelliferone
OMP_AN:7583		OMP:0000084	pilus phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	other:nylon filter temperature:37C medium:LB medium	ECO:0005033	electron microscopy evidence	PMID:24837471
OMP_AN:7584		OMP:0000028	decreased number of pili	Relative to: OMP_AN:7583 Genotype differences: no differences Condition differences: medium:Coumarin (50 ug/mL)?	other:nylon filter temperature:37C medium:Coumarin (50 ug/mL) medium:LB medium	ECO:0005033	electron microscopy evidence	PMID:24837471	CHEBI:28794 Coumarin
OMP_AN:7585		OMP:0000028	decreased number of pili	Relative to: OMP_AN:7583 Genotype differences: no differences Condition differences: medium:Umbelliferone (50 ug/mL)?	other:nylon filter temperature:37C medium:LB medium medium:Umbelliferone (50 ug/mL)	ECO:0005033	electron microscopy evidence	PMID:24837471	CHEBI:27510 Umbelliferone
OMP_AN:7591		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q93U24 csgA
OMP_AN:7592		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:P0ABK8 csgB
OMP_AN:7593		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q8XCE8 flhD
OMP_AN:7594		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:P0AF07 motB
OMP_AN:7595		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q7DI68 stx2
OMP_AN:7596		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q8XAY7 lsrA
OMP_AN:7597		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q8X902 luxS
OMP_AN:7598		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	rrsG
OMP_AN:7599		OMP:0000253	gene expression phenotype	Relative to: Genotype differences: Nothing to compare Condition differences: Nothing to compare	temperature:37C medium:LB medium	ECO:0000109	reverse transcription polymerase chain reaction evidence	PMID:24837471	UniProtKB:Q7DH26 stx1
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References

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