Difference between revisions of "OMP ST:5533 ! Schizosaccharomyces pombe ers1delta"

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!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
!align=left align='left' bgcolor='#CCCCFF' |Genotype
 
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ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32ers1delta
+
ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 ers1delta
 
|-
 
|-
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
 
!align=left align='left' bgcolor='#CCCCFF' |Strain Reference
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<!-- OMP category tags -->[[Category:OMP ST:1112 ! Schizosaccharomyces pombe SP286 derivatives]]
 
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<hr>Genotype differences:<br>
 
<hr>Genotype differences:<br>
−
+leu1-32/leu1-32ers1delta -leu1-32/leu1-32 -h+/h+
+
+ers1delta -h+/h+
 
<hr>Condition differences:<br>
 
<hr>Condition differences:<br>
−
no differences
+
:?
 +
temperature:?25-32C
 
|
 
|
  
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|
 
|
 
PMID:20473289
 
PMID:20473289
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:12331
 +
|
 +
 +
|
 +
OMP:0007460
 +
|
 +
viable vegetative cell population
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
 +
|
 +
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:14995
 +
|
 +
 +
|
 +
OMP:0007714
 +
|
 +
curving of vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:15029
 +
|
 +
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:17862
 +
|
 +
NOT
 +
|
 +
OMP:0007715
 +
|
 +
altered vegetative cell morphology
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:21886
 +
|
 +
 +
|
 +
OMP:0007716
 +
|
 +
viable vegetative cell
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
:?
 +
temperature:?25-32C
 +
|
 +
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:26706
 +
|
 +
 +
|
 +
OMP:0007782
 +
|
 +
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
other:hydroxyurea?
 +
temperature:?25-32C
 +
|
 +
other:hydroxyurea
 +
|
 +
ECO:0001098
 +
|
 +
microscopy evidence
 +
|
 +
PMID:23697806
 +
|
 +
CHEBI:44423 hydroxyurea
 +
 +
has_penetrance: FYPO_EXT:0000002 medium
 +
|
 +
 +
|-
 +
|
 +
OMP_AN:27084
 +
|
 +
 +
|
 +
OMP:0007803
 +
|
 +
decreased vegetative cell population growth rate
 +
|
 +
Relative to: OMP_AN:1028
 +
 +
<hr>Genotype differences:<br>
 +
+ers1delta  -h+/h+
 +
<hr>Condition differences:<br>
 +
medium:glucose MM?
 +
|
 +
*temperature:25-32C
 +
*medium:glucose MM
 +
|
 +
ECO:0007147
 +
|
 +
competitive growth assay evidence used in manual assertion
 +
|
 +
PMID:25452419
 
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Latest revision as of 14:46, 20 June 2018

Strain Summary

Strain Name

Schizosaccharomyces pombe ers1delta

Synonyms
Taxon Information
  • Pangenome: Schizosaccharomyces pombe
  • Subspecies and/or strain: ers1delta
  • NCBI Taxonomy ID:4896
Genotype

ade6-M210/ade6-M216 ura4-D18/ura4-D18 leu1-32/leu1-32 ers1delta

Strain Reference

PMID:20473289[1]

Strain availability

http://us.bioneer.com/products/spombe/spombeoverview.aspx

Ancestry

parent:OMP ST:1112 ! Schizosaccharomyces pombe SP286

Annotated phenotypes


edit table


Notes

Phenotype Annotation

Annotation ID Qualifier OMP ID OMP term name Relative phenotype information Experimental condition ECO ID ECO term name Reference Annotation Extension Notes

OMP_AN:6776

OMP:0007460

viable cell

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:20473289[1]

OMP_AN:12331

OMP:0007460

viable vegetative cell population

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

PMID:23697806[2]

OMP_AN:14995

OMP:0007714

curving of vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:15029

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:17862

NOT

OMP:0007715

altered vegetative cell morphology

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:21886

OMP:0007716

viable vegetative cell

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:
?

temperature:?25-32C

ECO:0001098

microscopy evidence

PMID:23697806[2]

OMP_AN:26706

OMP:0007782

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:

other:hydroxyurea? temperature:?25-32C

other:hydroxyurea

ECO:0001098

microscopy evidence

PMID:23697806[2]

CHEBI:44423 hydroxyurea

has_penetrance: FYPO_EXT:0000002 medium

OMP_AN:27084

OMP:0007803

decreased vegetative cell population growth rate

Relative to: OMP_AN:1028

Genotype differences:

+ers1delta -h+/h+

Condition differences:

medium:glucose MM?

  • temperature:25-32C
  • medium:glucose MM
 ECO:0007147

competitive growth assay evidence used in manual assertion

PMID:25452419[3]


edit table


Additional Information

Links

References

See Help:References for how to manage references in OMPwiki.

  1. ↑ 1.0 1.1 Kim, DU et al. (2010) Analysis of a genome-wide set of gene deletions in the fission yeast Schizosaccharomyces pombe. Nat. Biotechnol. 28 617-623 PubMed OMPwiki page
  2. ↑ 2.0 2.1 2.2 2.3 2.4 2.5 Hayles, J et al. (2013) A genome-wide resource of cell cycle and cell shape genes of fission yeast. Open Biol 3 130053 PubMed OMPwiki page
  3. ↑ Sideri, T et al. (2014) Parallel profiling of fission yeast deletion mutants for proliferation and for lifespan during long-term quiescence. G3 (Bethesda) 5 145-55 PubMed OMPwiki page
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